RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 COL5A3P25940 1745 aaPredicted RBP8.55□□□□□ -1.04
SKA2-201ENST00000330137 C1orf232A0A0U1RR37 186 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 SLC15A5A6NIM6 579 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 CXorf49A8MYA2 514 aaPredicted RBP8.55□□□□□ -1.04
SKA2-201ENST00000330137 H0YAE9 185 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 VWA5AO00534 786 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 HDAC3O15379 428 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 LYPLA1O75608 230 aaPredicted RBP8.55□□□□□ -1.04
SKA2-201ENST00000330137 APOA4P06727 396 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 KRT3P12035 628 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 FCGR1AP12314 374 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 BMP1P13497 986 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 ENDOUP21128 410 aaKnown RBP8.55□□□□□ -1.04
SKA2-201ENST00000330137 KDELR1P24390 212 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 CDH5P33151 784 aaPredicted RBP8.55□□□□□ -1.04
SKA2-201ENST00000330137 GJC1P36383 396 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 HPCAL1P37235 193 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 GRIK1P39086 918 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 ROR1Q01973 937 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 CYP24A1Q07973 514 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 STX5Q13190 355 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 ARHGEF6Q15052 776 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 ATP13A4Q4VNC1 1196 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 PPM1LQ5SGD2 360 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 PPP2R2DQ66LE6 453 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 SIGIRRQ6IA17 410 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 TMEM26Q6ZUK4 368 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 KCTD8Q6ZWB6 473 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 UNC45BQ8IWX7 931 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 RDH11Q8TC12 318 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 ZC3H15Q8WU90 426 aaKnown RBP8.55□□□□□ -1.04
SKA2-201ENST00000330137 ATL1Q8WXF7 558 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 FAF2Q96CS3 445 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 ZNF486Q96H40 463 aaPredicted RBP8.55□□□□□ -1.04
SKA2-201ENST00000330137 CCDC17Q96LX7 622 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 EBNA1BP2Q99848 306 aaKnown RBP8.55□□□□□ -1.04
SKA2-201ENST00000330137 ILKAPQ9H0C8 392 aaPredicted RBP8.55□□□□□ -1.04
SKA2-201ENST00000330137 UPF3AQ9H1J1 476 aaKnown RBP8.55□□□□□ -1.04
SKA2-201ENST00000330137 ANLNQ9NQW6 1124 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 KCNQ5Q9NR82 932 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 TOPORSQ9NS56 1045 aaPredicted RBP8.55□□□□□ -1.04
SKA2-201ENST00000330137 UGT2A1Q9Y4X1 527 aa8.55□□□□□ -1.04
SKA2-201ENST00000330137 QSER1Q2KHR3 1735 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 MYH9P35579 1960 aaKnown RBP8.54□□□□□ -1.04
SKA2-201ENST00000330137 AQP12BA6NM10 295 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 TRIM24O15164 1050 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 VAPBO95292 243 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 CD247P20963 164 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 ACO1P21399 889 aaKnown RBP8.54□□□□□ -1.04
SKA2-201ENST00000330137 GARTP22102 1010 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 ZNF76P36508 570 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 BTDP43251 543 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 CDH15P55291 814 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 SLC25A11Q02978 314 aaKnown RBP8.54□□□□□ -1.04
SKA2-201ENST00000330137 PRKCQQ04759 706 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 ZNF252P-AS1Q0IIN9 211 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 KRR1Q13601 381 aaKnown RBP8.54□□□□□ -1.04
SKA2-201ENST00000330137 TFDP2Q14188 446 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 NOMO1Q15155 1222 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 SF3B4Q15427 424 aaKnown RBP eCLIP8.54□□□□□ -1.04
SKA2-201ENST00000330137 ZYXQ15942 572 aaKnown RBP8.54□□□□□ -1.04
SKA2-201ENST00000330137 BRDTQ58F21 947 aaPredicted RBP8.54□□□□□ -1.04
SKA2-201ENST00000330137 DNAJC24Q6P3W2 148 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 DARS2Q6PI48 645 aaKnown RBP8.54□□□□□ -1.04
SKA2-201ENST00000330137 PADI6Q6TGC4 694 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 CHSY3Q70JA7 882 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 BPHLQ86WA6 291 aaPredicted RBP8.54□□□□□ -1.04
SKA2-201ENST00000330137 MAP4K3Q8IVH8 894 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 HERC6Q8IVU3 1022 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 AQP12AQ8IXF9 295 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 BEST2Q8NFU1 509 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 CMASQ8NFW8 434 aaPredicted RBP8.54□□□□□ -1.04
SKA2-201ENST00000330137 GRIN3AQ8TCU5 1115 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 JDP2Q8WYK2 163 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 LRTOMTQ8WZ04 291 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 ATP6V1E2Q96A05 226 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 CFAP36Q96G28 342 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 RIT2Q99578 217 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 TRIM15Q9C019 465 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 RAP2CQ9Y3L5 183 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 RAD54BQ9Y620 910 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 FER1L6Q2WGJ9 1857 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 FAM170AA1A519 330 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 J3QRK9 145 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 ALX3O95076 343 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 CSH1P0DML2 217 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 CSH2P0DML3 217 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 MLNP12872 115 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 ZNF182P17025 639 aaPredicted RBP8.54□□□□□ -1.04
SKA2-201ENST00000330137 GNA15P30679 374 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 GARSP41250 739 aaKnown RBP8.54□□□□□ -1.04
SKA2-201ENST00000330137 PTGER2P43116 358 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 MAGEA12P43365 314 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 STX1BP61266 288 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 RPL10AP62906 217 aaKnown RBP8.54□□□□□ -1.04
SKA2-201ENST00000330137 C19orf57Q0VDD7 668 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 SUZ12Q15022 739 aaKnown RBP8.54□□□□□ -1.04
SKA2-201ENST00000330137 TMTC4Q5T4D3 741 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 TTBK2Q6IQ55 1244 aa8.54□□□□□ -1.04
SKA2-201ENST00000330137 INTS5Q6P9B9 1019 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms