RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 DEFB132Q7Z7B7 95 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 CPNE1Q99829 537 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 GNPTGQ9UJJ9 305 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 NDUFAF1Q9Y375 327 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 RAD54BQ9Y620 910 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 CLTCL1P53675 1640 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 GH1P01241 217 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 PDGFRAP16234 1089 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 PGAM1P18669 254 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 GARTP22102 1010 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 GTF2A2P52657 109 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 SCN1BQ07699 218 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 USP49Q70CQ1 688 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 NECAB2Q7Z6G3 386 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 FAM120BQ96EK7 910 aaKnown RBP5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 EIF2AK1Q9BQI3 630 aaKnown RBP5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 SLC4A5Q9BY07 1137 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 EPB41L1Q9H4G0 881 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 RERGLQ9H628 205 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 BARX2Q9UMQ3 279 aaPredicted RBP5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 TRIM38O00635 465 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 GJB6O95452 261 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 NME5P56597 212 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 RALGDSQ12967 914 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 PDK2Q15119 407 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 SHROOM1Q2M3G4 852 aaPredicted RBP5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 AADATQ8N5Z0 425 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 OR8H1Q8NGG4 311 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 MAGEE2Q8TD90 523 aaPredicted RBP5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 GLT1D1Q96MS3 346 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 EMILIN2Q9BXX0 1053 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 MED28Q9H204 178 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 FAM49BQ9NUQ9 324 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 ABI2Q9NYB9 513 aaPredicted RBP5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 ACOT9Q9Y305 439 aa5.46□□□□□ -1.53
SDR42E1-201ENST00000328945 DIP2CQ9Y2E4 1556 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 NDUFB5O43674 189 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 TMCC2O75069 709 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 VPS72Q15906 364 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 RABL6Q3YEC7 729 aaPredicted RBP5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 HIPK1Q86Z02 1210 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 EMC1Q8N766 993 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 RNF148Q8N7C7 305 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 FEZF2Q8TBJ5 459 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 C3orf18Q9UK00 162 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 NCANO14594 1321 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 TRIP12Q14669 1992 aaPredicted RBP5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 FAM237BA0A1B0GVD1 139 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 CAPN8A6NHC0 703 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 DCDC2CA8MYV0 355 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 CYP27B1O15528 508 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 SERPINA1P01009 418 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 PTPN7P35236 360 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 TNK2Q07912 1038 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 UBAP2LQ14157 1087 aaKnown RBP5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 FRMD7Q6ZUT3 714 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 UTS2BQ765I0 119 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 FAM228AQ86W67 206 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 ERI1Q8IV48 349 aaKnown RBP5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 SMYD1Q8NB12 490 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 LINC00116Q8NCU8 138 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 KATNAL1Q9BW62 490 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 CMTM6Q9NX76 183 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 ARHGEF33A8MVX0 844 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 GSC2O15499 205 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 EDF1O60869 148 aaKnown RBP5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 TDP2O95551 362 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 TUFMP49411 452 aaKnown RBP5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 AQP4P55087 323 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 ANTXR2P58335 489 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 PSMC5P62195 406 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 LIN54Q6MZP7 749 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 PLET1Q6UQ28 207 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 EPHX4Q8IUS5 362 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 RNF149Q8NC42 400 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 MUC13Q9H3R2 512 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 TMEM260Q9NX78 707 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 AKAP7Q9P0M2 348 aaPredicted RBP5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 PRKAG3Q9UGI9 489 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 ITGA11Q9UKX5 1188 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 CCRL2O00421 344 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 SYNCRIPO60506 623 aaKnown RBP5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 AVPR1AP37288 418 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 SULT1E1P49888 294 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 QPCTQ16769 361 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 BOLA3Q53S33 107 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 TYW3Q6IPR3 259 aaKnown RBP5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 NT5DC3Q86UY8 548 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 PM20D2Q8IYS1 436 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 KCTD4Q8WVF5 259 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 ABCC3O15438 1527 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 POU1F1P28069 291 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 GRIA3P42263 894 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 ALDH7A1P49419 539 aaKnown RBP5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 LRRC74AQ0VAA2 488 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 EFR3AQ14156 821 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 AKIRIN2Q53H80 203 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 OR8H3Q8N146 312 aa5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 PTCD3Q96EY7 689 aaKnown RBP5.46□□□□□ -1.54
SDR42E1-201ENST00000328945 KLHL1Q9NR64 748 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms