RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 MESP2Q0VG99 397 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 ZNF177Q13360 481 aaPredicted RBP15.65■□□□□ 0.1
PRPF3-201ENST00000324862 PDK1Q15118 436 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 PRKD1Q15139 912 aaPredicted RBP15.65■□□□□ 0.1
PRPF3-201ENST00000324862 EML3Q32P44 896 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 ASTLQ6HA08 431 aaPredicted RBP15.65■□□□□ 0.1
PRPF3-201ENST00000324862 CCDC26Q8TAB7 109 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 OSCP1Q8WVF1 389 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 SPON2Q9BUD6 331 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 EPB41L5Q9HCM4 733 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 GTSE1Q9NYZ3 720 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 SNX24Q9Y343 169 aa15.65■□□□□ 0.1
PRPF3-201ENST00000324862 MBTPS2O43462 519 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 KRT14P02533 472 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 RHOCP08134 193 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 TYRP14679 529 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 CD70P32970 193 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 GNA12Q03113 381 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 ZBTB17Q13105 803 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 CDH18Q13634 790 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 MPPE1Q53F39 396 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 FAXCQ5TGI0 409 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 RNF219Q5W0B1 726 aaPredicted RBP15.64■□□□□ 0.09
PRPF3-201ENST00000324862 C12orf40Q86WS4 652 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 ATPAF2Q8N5M1 289 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 HTR3CQ8WXA8 447 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 ARHGEF2Q92974 986 aaKnown RBP15.64■□□□□ 0.09
PRPF3-201ENST00000324862 KIF9Q9HAQ2 790 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 TRPV4Q9HBA0 871 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 DRG1Q9Y295 367 aaKnown RBP15.64■□□□□ 0.09
PRPF3-201ENST00000324862 NUMBLQ9Y6R0 609 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 C2CD4DB7Z1M9 353 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 CYP17A1P05093 508 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 TCF3P15923 654 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 CSKP41240 450 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 MAPKAPK2P49137 400 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 PPIDQ08752 370 aaKnown RBP15.64■□□□□ 0.09
PRPF3-201ENST00000324862 WASHC5Q12768 1159 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 DHCR24Q15392 516 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 ACBD5Q5T8D3 534 aaPredicted RBP15.64■□□□□ 0.09
PRPF3-201ENST00000324862 HEATR6Q6AI08 1181 aaKnown RBP15.64■□□□□ 0.09
PRPF3-201ENST00000324862 APCDD1Q8J025 514 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 HDAC11Q96DB2 347 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 IPO11Q9UI26 975 aaKnown RBP15.64■□□□□ 0.09
PRPF3-201ENST00000324862 TBC1D30Q9Y2I9 924 aa15.64■□□□□ 0.09
PRPF3-201ENST00000324862 BCLAF3A2AJT9 711 aaKnown RBP15.63■□□□□ 0.09
PRPF3-201ENST00000324862 PPP1R12AO14974 1030 aaPredicted RBP15.63■□□□□ 0.09
PRPF3-201ENST00000324862 SNAP91O60641 907 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 MYBL2P10244 700 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 HLA-FP30511 346 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 XRCC4Q13426 336 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 DHX34Q14147 1143 aaKnown RBP15.63■□□□□ 0.09
PRPF3-201ENST00000324862 IL31Q6EBC2 164 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 CHST9Q7L1S5 443 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 MAATS1Q7Z4T9 603 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 LZTR1Q8N653 840 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 CASKIN2Q8WXE0 1202 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 FAM83CQ9BQN1 747 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 MUC3BQ9H195 1237 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 HPS4Q9NQG7 708 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 TBC1D14Q9P2M4 693 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 ASIC3Q9UHC3 531 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 NYNRINQ9P2P1 1898 aaKnown RBP15.63■□□□□ 0.09
PRPF3-201ENST00000324862 TYW5A2RUC4 315 aaKnown RBP15.63■□□□□ 0.09
PRPF3-201ENST00000324862 RPL22P35268 128 aaKnown RBP15.63■□□□□ 0.09
PRPF3-201ENST00000324862 RPL21P46778 160 aaKnown RBP15.63■□□□□ 0.09
PRPF3-201ENST00000324862 IFNAR2P48551 515 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 CLCN6P51797 869 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 NDST2P52849 883 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 VSNL1P62760 191 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 LMAN2Q12907 356 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 LINGO4Q6UY18 593 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 CDKL3Q8IVW4 592 aaPredicted RBP15.63■□□□□ 0.09
PRPF3-201ENST00000324862 CCDC89Q8N998 374 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 SLCO2A1Q92959 643 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 HLA-CQ95604 372 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 AGAP3Q96P47 875 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 ERP44Q9BS26 406 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 PARD6BQ9BYG5 372 aa15.63■□□□□ 0.09
PRPF3-201ENST00000324862 TTC24A2A3L6 582 aaPredicted RBP15.62■□□□□ 0.09
PRPF3-201ENST00000324862 RNF103O00237 685 aa15.62■□□□□ 0.09
PRPF3-201ENST00000324862 PEX11BO96011 259 aa15.62■□□□□ 0.09
PRPF3-201ENST00000324862 PENKP01210 267 aaPredicted RBP15.62■□□□□ 0.09
PRPF3-201ENST00000324862 JCHAINP01591 159 aa15.62■□□□□ 0.09
PRPF3-201ENST00000324862 IVDP26440 423 aa15.62■□□□□ 0.09
PRPF3-201ENST00000324862 CARSP49589 748 aaKnown RBP15.62■□□□□ 0.09
PRPF3-201ENST00000324862 SERINC3Q13530 473 aa15.62■□□□□ 0.09
PRPF3-201ENST00000324862 C6orf118Q5T5N4 469 aa15.62■□□□□ 0.09
PRPF3-201ENST00000324862 CCDC13Q8IYE1 715 aa15.62■□□□□ 0.09
PRPF3-201ENST00000324862 IFT81Q8WYA0 676 aa15.62■□□□□ 0.09
PRPF3-201ENST00000324862 NECTIN4Q96NY8 510 aa15.62■□□□□ 0.09
PRPF3-201ENST00000324862 FEM1AQ9BSK4 669 aa15.62■□□□□ 0.09
PRPF3-201ENST00000324862 FRMD8P1Q9BZ68 369 aaPredicted RBP15.62■□□□□ 0.09
PRPF3-201ENST00000324862 NEUROG2Q9H2A3 272 aa15.62■□□□□ 0.09
PRPF3-201ENST00000324862 PRDM16Q9HAZ2 1276 aa15.62■□□□□ 0.09
PRPF3-201ENST00000324862 ABCB8Q9NUT2 735 aa15.62■□□□□ 0.09
PRPF3-201ENST00000324862 INTS6Q9UL03 887 aaKnown RBP15.62■□□□□ 0.09
PRPF3-201ENST00000324862 TTLL3Q9Y4R7 772 aa15.62■□□□□ 0.09
PRPF3-201ENST00000324862 NUP210Q8TEM1 1887 aaPredicted RBP15.62■□□□□ 0.09
PRPF3-201ENST00000324862 ANTXRLA6NF34 631 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms