RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 ZNF540Q8NDQ6 660 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 FRMD6Q96NE9 622 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 OPTCQ9UBM4 332 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 N6AMT1Q9Y5N5 214 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 TAF6LQ9Y6J9 622 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 ANKRD12Q6UB98 2062 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 NDUFB10O96000 172 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 PTPN1P18031 435 aaKnown RBP12.34□□□□□ -0.43
FARP1-201ENST00000319562 C1QBPQ07021 282 aaKnown RBP12.34□□□□□ -0.43
FARP1-201ENST00000319562 MARK2Q7KZI7 788 aaKnown RBP12.34□□□□□ -0.43
FARP1-201ENST00000319562 HIPK1Q86Z02 1210 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 SCAIQ8N9R8 606 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 TLR8Q9NR97 1041 aaKnown RBP12.34□□□□□ -0.43
FARP1-201ENST00000319562 MED24O75448 989 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 FGFR1P11362 822 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 NTSP30990 170 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 IL27RAQ6UWB1 636 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 PARK7Q99497 189 aaKnown RBP12.34□□□□□ -0.43
FARP1-201ENST00000319562 RBM22Q9NW64 420 aaKnown RBP eCLIP12.34□□□□□ -0.431e-7■■■□□ 16.9
FARP1-201ENST00000319562 TOR4AQ9NXH8 423 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 C16orf86Q6ZW13 317 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 OFCC1Q8IZS5 231 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 APOL2Q9BQE5 337 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 PNPLA3Q9NST1 481 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 AK5Q9Y6K8 562 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 ZFYVE16Q7Z3T8 1539 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 RPL5P46777 297 aaKnown RBP12.34□□□□□ -0.43
FARP1-201ENST00000319562 PDK3Q15120 406 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 SLC45A4Q5BKX6 768 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 ZNF549Q6P9A3 640 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 SP8Q8IXZ3 490 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 CHST13Q8NET6 341 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 PHF10Q8WUB8 498 aaKnown RBP12.34□□□□□ -0.43
FARP1-201ENST00000319562 UBE2E3Q969T4 207 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 TRMT13Q9NUP7 481 aaKnown RBP12.34□□□□□ -0.43
FARP1-201ENST00000319562 ERVK-7P63135 1459 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 FAM25EA8MYX2 175 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 C2CD2LO14523 706 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 CYB561D2O14569 222 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 IGKV5-2P06315 115 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 RXRBP28702 533 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 VBP1P61758 197 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 SPIDRQ14159 915 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 PERM1Q5SV97 790 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 DSG4Q86SJ6 1040 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 POU5F2Q8N7G0 328 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 RP9Q8TA86 221 aaKnown RBP12.34□□□□□ -0.43
FARP1-201ENST00000319562 SEMA4DQ92854 862 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 HACD1B0YJ81 288 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 ZBTB14O43829 449 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 ZMYM5Q9UJ78 669 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 IQCMA0A1B0GVH7 501 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 RTN3O95197 1032 aaPredicted RBP12.34□□□□□ -0.43
FARP1-201ENST00000319562 APOC1P02654 83 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 LTFP02788 710 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 CKMP06732 381 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 CCR1P32246 355 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 NT5DC3Q86UY8 548 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 MIB1Q86YT6 1006 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 SYT12Q8IV01 421 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 DNAJC1Q96KC8 554 aaKnown RBP12.34□□□□□ -0.43
FARP1-201ENST00000319562 C1QTNF7Q9BXJ2 289 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 ARMCX1Q9P291 453 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 CAPN6Q9Y6Q1 641 aa12.34□□□□□ -0.43
FARP1-201ENST00000319562 CCR4P51679 360 aa12.33□□□□□ -0.43
FARP1-201ENST00000319562 NSUN4Q96CB9 384 aaKnown RBP12.33□□□□□ -0.43
FARP1-201ENST00000319562 CCNB1IP1Q9NPC3 277 aa12.33□□□□□ -0.43
FARP1-201ENST00000319562 SERPINA1P01009 418 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 EPHA10Q5JZY3 1008 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 GLT6D1Q7Z4J2 308 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 R3HCC1LQ7Z5L2 792 aaKnown RBP12.33□□□□□ -0.44
FARP1-201ENST00000319562 SLC47A2Q86VL8 602 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 TCAIMQ8N3R3 496 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 BORCS5Q969J3 196 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 VPS35Q96QK1 796 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 POMKQ9H5K3 350 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 KCNH7Q9NS40 1196 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 SNX6Q9UNH7 406 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.33□□□□□ -0.44
FARP1-201ENST00000319562 PSMD11O00231 422 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 COX7A2P14406 83 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 ELK3P41970 407 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 TMEM176AQ96HP8 235 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 REXO5Q96IC2 774 aaKnown RBP12.33□□□□□ -0.44
FARP1-201ENST00000319562 SLC35C2Q9NQQ7 365 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 SAGE2PA6NJ88 616 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 LDOC1O95751 146 aaPredicted RBP12.33□□□□□ -0.44
FARP1-201ENST00000319562 MT-CO1P00395 513 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 BMP7P18075 431 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 POLR2LP62875 67 aaKnown RBP12.33□□□□□ -0.44
FARP1-201ENST00000319562 SQLEQ14534 574 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 ZNHIT3Q15649 155 aaPredicted RBP12.33□□□□□ -0.44
FARP1-201ENST00000319562 GIPC3Q8TF64 312 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 TBCDQ9BTW9 1192 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 FBXO44Q9H4M3 255 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 CLK4Q9HAZ1 481 aaKnown RBP12.33□□□□□ -0.44
FARP1-201ENST00000319562 DUSP10Q9Y6W6 482 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 LOC110117498-PIK3R3F6TDL0 507 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 POLD2P49005 469 aa12.33□□□□□ -0.44
FARP1-201ENST00000319562 TYSND1Q2T9J0 566 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms