RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 MARCH10Q8NA82 808 aaPredicted RBP4.59□□□□□ -1.67
CNOT1-201ENST00000317147 FBXO36Q8NEA4 188 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 SETD6Q8TBK2 473 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 BAP1Q92560 729 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 NKD2Q969F2 451 aaPredicted RBP4.59□□□□□ -1.67
CNOT1-201ENST00000317147 WNK4Q96J92 1243 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 ZNF560Q96MR9 790 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 NUAK2Q9H093 628 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 DCP1AQ9NPI6 582 aaPredicted RBP4.59□□□□□ -1.67
CNOT1-201ENST00000317147 HSPBP1Q9NZL4 362 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 PCDHGB4Q9UN71 923 aa4.59□□□□□ -1.67
CNOT1-201ENST00000317147 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.59□□□□□ -1.68
CNOT1-201ENST00000317147 USP17L3A6NCW0 530 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 USP17L4A6NCW7 530 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 PDGFRAP16234 1089 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 CFL1P23528 166 aaKnown RBP4.59□□□□□ -1.68
CNOT1-201ENST00000317147 EIF4BP23588 611 aaKnown RBP4.59□□□□□ -1.68
CNOT1-201ENST00000317147 RGS4P49798 205 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 KPNA1P52294 538 aaPredicted RBP4.59□□□□□ -1.68
CNOT1-201ENST00000317147 RTP1P59025 263 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 CHRNDQ07001 517 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 PLCL1Q15111 1095 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 HABP4Q5JVS0 413 aaKnown RBP4.59□□□□□ -1.68
CNOT1-201ENST00000317147 SLFN13Q68D06 897 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 PMF1Q6P1K2 205 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 TTC23LQ6PF05 361 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 LRRC55Q6ZSA7 311 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 KIAA0408Q6ZU52 694 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 PLEKHM3Q6ZWE6 761 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 USP17L1Q7RTZ2 530 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 CATSPER3Q86XQ3 398 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 SPAG16Q8N0X2 631 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 GALNT4Q8N4A0 578 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 C9orf43Q8TAL5 461 aaPredicted RBP4.59□□□□□ -1.68
CNOT1-201ENST00000317147 C9orf72Q96LT7 481 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 MRPL57Q9BQC6 102 aaKnown RBP4.59□□□□□ -1.68
CNOT1-201ENST00000317147 SH2D3AQ9BRG2 576 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 CDH22Q9UJ99 828 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 BAIAP2Q9UQB8 552 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 ACOT9Q9Y305 439 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 PLLPQ9Y342 182 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 SH3BP1Q9Y3L3 701 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 MTF2Q9Y483 593 aaPredicted RBP4.59□□□□□ -1.68
CNOT1-201ENST00000317147 TNPO3Q9Y5L0 923 aaKnown RBP4.59□□□□□ -1.68
CNOT1-201ENST00000317147 FRMPD2Q68DX3 1309 aaPredicted RBP4.59□□□□□ -1.68
CNOT1-201ENST00000317147 A0A087X0B3 334 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 K7ERI5 159 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 RNF225M0QZC1 329 aaPredicted RBP4.59□□□□□ -1.68
CNOT1-201ENST00000317147 FSCN2O14926 492 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 MYBP10242 640 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 COX4I1P13073 169 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 SLC7A1P30825 629 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 RRM2P31350 389 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 HTR7P34969 479 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 YAP1P46937 504 aaKnown RBP4.59□□□□□ -1.68
CNOT1-201ENST00000317147 NFIAQ12857 509 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 TRIP4Q15650 581 aaPredicted RBP4.59□□□□□ -1.68
CNOT1-201ENST00000317147 TBCELQ5QJ74 424 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 ZNF410Q86VK4 478 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 CYP4Z2PQ8N1L4 340 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 MYLPFQ96A32 169 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 CREB3L1Q96BA8 519 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 CLPTM1LQ96KA5 538 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 NSMCE2Q96MF7 247 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 MSTO1Q9BUK6 570 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 TFCP2L1Q9NZI6 479 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 COPZ2Q9P299 210 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 FBXO40Q9UH90 709 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 GIT1Q9Y2X7 761 aa4.59□□□□□ -1.68
CNOT1-201ENST00000317147 PTPRJQ12913 1337 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 METTL21EPA6NDL7 271 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 EFCAB10A6NFE3 127 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 FBP2O00757 339 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 CLIC2O15247 247 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 PAPSS1O43252 624 aaPredicted RBP4.58□□□□□ -1.68
CNOT1-201ENST00000317147 CYP1A1P04798 512 aaPredicted RBP4.58□□□□□ -1.68
CNOT1-201ENST00000317147 DAB2P98082 770 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 IL1RL1Q01638 556 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 OTUD4Q01804 1114 aaKnown RBP4.58□□□□□ -1.68
CNOT1-201ENST00000317147 CACNB1Q02641 598 aaPredicted RBP4.58□□□□□ -1.68
CNOT1-201ENST00000317147 VAC14Q08AM6 782 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 TRIM32Q13049 653 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 TRIM25Q14258 630 aaKnown RBP4.58□□□□□ -1.68
CNOT1-201ENST00000317147 CLEC16AQ2KHT3 1053 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 ACCSLQ4AC99 568 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 DENND5AQ6IQ26 1287 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 ASRGL1Q7L266 308 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 NIPA1Q7RTP0 329 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 OTOAQ7RTW8 1153 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 LRRC17Q8N6Y2 441 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 ACOT12Q8WYK0 555 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 SNX19Q92543 992 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 ISCA1Q9BUE6 129 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 SLC13A1Q9BZW2 595 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 NECTIN3Q9NQS3 549 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 INTS10Q9NVR2 710 aaKnown RBP4.58□□□□□ -1.68
CNOT1-201ENST00000317147 NINJ2Q9NZG7 142 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 PI4KBQ9UBF8 816 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 PFDN2Q9UHV9 154 aa4.58□□□□□ -1.68
CNOT1-201ENST00000317147 HSPE1-MOB4S4R3N1 261 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms