RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 NUMBLQ9Y6R0 609 aa12.7□□□□□ -0.38
RNF4-201ENST00000314289 PTPRDP23468 1912 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 TTC24A2A3L6 582 aaPredicted RBP12.69□□□□□ -0.38
RNF4-201ENST00000314289 EOMESO95936 686 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 ETV4P43268 484 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 TUBP50607 506 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 TEX44Q53QW1 395 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 DEFB128Q7Z7B8 93 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 ZNF483Q8TF39 744 aaPredicted RBP12.69□□□□□ -0.38
RNF4-201ENST00000314289 IRGQQ8WZA9 623 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 UTP4Q969X6 686 aaKnown RBP12.69□□□□□ -0.38
RNF4-201ENST00000314289 PPP1R12CQ9BZL4 782 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 SLC39A8Q9C0K1 460 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 MARCOQ9UEW3 520 aaPredicted RBP12.69□□□□□ -0.38
RNF4-201ENST00000314289 HAO1Q9UJM8 370 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 VWA8A3KMH1 1905 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 ARVCFO00192 962 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 ENPP3O14638 875 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 KRT38O76015 456 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 TOMM70O94826 608 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 UNC5CO95185 931 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 PDHA1P08559 390 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 KITP10721 976 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 RPL17P18621 184 aaKnown RBP12.69□□□□□ -0.38
RNF4-201ENST00000314289 TYMPP19971 482 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 CCR1P32246 355 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 SLC18A2Q05940 514 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 GALNT2Q10471 571 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 MGAT5BQ3V5L5 792 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 CES4AQ5XG92 561 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 RASSF3Q86WH2 238 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 CIR1Q86X95 450 aaPredicted RBP12.69□□□□□ -0.38
RNF4-201ENST00000314289 GIPC2Q8TF65 315 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 ATP2A3Q93084 1043 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 NAF1Q96HR8 494 aaKnown RBP12.69□□□□□ -0.38
RNF4-201ENST00000314289 ZFATQ9P243 1243 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 NEU3Q9UQ49 428 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 PCDHB7Q9Y5E2 793 aa12.69□□□□□ -0.38
RNF4-201ENST00000314289 C2CD2LO14523 706 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 TM9SF1O15321 606 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 SERPINB4P48594 390 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 SLC18A1P54219 525 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 PSMD5Q16401 504 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 PRSS55Q6UWB4 352 aaPredicted RBP12.68□□□□□ -0.38
RNF4-201ENST00000314289 TMCO2Q7Z6W1 182 aaPredicted RBP12.68□□□□□ -0.38
RNF4-201ENST00000314289 CMC1Q7Z7K0 106 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 ZNF354CQ86Y25 554 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 PNPLA1Q8N8W4 532 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 RAB3IPQ96QF0 476 aaPredicted RBP12.68□□□□□ -0.38
RNF4-201ENST00000314289 PLCD4Q9BRC7 762 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 ZCWPW1Q9H0M4 648 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 SPATS2LQ9NUQ6 558 aaKnown RBP12.68□□□□□ -0.38
RNF4-201ENST00000314289 ZNF358Q9NW07 568 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 IGSF9Q9P2J2 1179 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 CHKBQ9Y259 395 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 HS3ST4Q9Y661 456 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 TPP1O14773 563 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 IGLV3-25P01717 112 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 SELPP16109 830 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 PGAM1P18669 254 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 SAT1P21673 171 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 SERPINB6P35237 376 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 AIF1P55008 147 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 HSP90AA5PQ58FG0 334 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 RTP2Q5QGT7 225 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 IPMKQ8NFU5 416 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 ALKBH8Q96BT7 664 aaKnown RBP12.68□□□□□ -0.38
RNF4-201ENST00000314289 HDAC11Q96DB2 347 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 LBHD1Q9BQE6 289 aaPredicted RBP12.68□□□□□ -0.38
RNF4-201ENST00000314289 UNC93B1Q9H1C4 597 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 RRN3Q9NYV6 651 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 ADAM28Q9UKQ2 775 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 STARD13Q9Y3M8 1113 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 MYO16Q9Y6X6 1858 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 SF3B1O75533 1304 aaKnown RBP eCLIP12.68□□□□□ -0.381e-6■■■■■ 109.1
RNF4-201ENST00000314289 PMPCBO75439 489 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 OAZ2O95190 189 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 AP2A1O95782 977 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 ALDOAP04075 364 aaKnown RBP12.68□□□□□ -0.38
RNF4-201ENST00000314289 CCNB1P14635 433 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 MX2P20592 715 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 SLC11A1P49279 550 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 PDE1BQ01064 536 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 BLMHQ13867 455 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 SETDB1Q15047 1291 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 LGSNQ5TDP6 509 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 PIK3R6Q5UE93 754 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 PACS1Q6VY07 963 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 ARHGAP12Q8IWW6 846 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 NUP93Q8N1F7 819 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 ATPAF2Q8N5M1 289 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 TSSK1BQ9BXA7 367 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 CAB39LQ9H9S4 337 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 TXLNGQ9NUQ3 528 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 TRIM17Q9Y577 477 aa12.68□□□□□ -0.38
RNF4-201ENST00000314289 E9PAM4 449 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 CNTN5O94779 1100 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 POLBP06746 335 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 HCAR3P49019 387 aa12.67□□□□□ -0.38
RNF4-201ENST00000314289 MAXP61244 160 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms