RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 PLXNA2O75051 1894 aa16.76■□□□□ 0.27
LSM1-201ENST00000311351 TP53BP1Q12888 1972 aaPredicted RBP16.75■□□□□ 0.27
LSM1-201ENST00000311351 IGLV3-10A0A075B6K4 115 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 DRGXA6NNA5 263 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 METTL12A8MUP2 240 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 SNAP91O60641 907 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 SRGAP2O75044 1071 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 SEMA4FO95754 770 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 SERPINC1P01008 464 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 KRT3P12035 628 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 PTMSP20962 102 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 RFC1P35251 1148 aaPredicted RBP16.75■□□□□ 0.27
LSM1-201ENST00000311351 PTPN9P43378 593 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 SULT2A1Q06520 285 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 LRRC31Q6UY01 552 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 RABEPKQ7Z6M1 372 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 C3orf20Q8ND61 904 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 GANCQ8TET4 914 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 FRS2Q8WU20 508 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 DNASE2BQ8WZ79 361 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 FAM129BQ96TA1 746 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 PSMB7Q99436 277 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 EIF2B4Q9UI10 523 aaKnown RBP16.75■□□□□ 0.27
LSM1-201ENST00000311351 SLC25A13Q9UJS0 675 aa16.75■□□□□ 0.27
LSM1-201ENST00000311351 A0A0D9SEW6 157 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 A0A1W2PP55 124 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 A0A1W2PQC6 194 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 TCRBV5S1A1TA0A578 114 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 TARSL2A2RTX5 802 aaKnown RBP16.74■□□□□ 0.27
LSM1-201ENST00000311351 RNASEH1O60930 286 aaKnown RBP16.74■□□□□ 0.27
LSM1-201ENST00000311351 GPD1P21695 349 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 NNMTP40261 264 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 HDAC4P56524 1084 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 GFPT1Q06210 699 aaPredicted RBP16.74■□□□□ 0.27
LSM1-201ENST00000311351 ASIC2Q16515 512 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 DAB2IPQ5VWQ8 1189 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 DNAJC24Q6P3W2 148 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 WDR59Q6PJI9 974 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 CCDC185Q8N715 623 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 OR7D4Q8NG98 312 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 FAM172AQ8WUF8 416 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 C1orf74Q96LT6 269 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 HAPLN3Q96S86 360 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 MAGEB5Q9BZ81 275 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 TTYH3Q9C0H2 523 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 BTBD1Q9H0C5 482 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 FBXL12Q9NXK8 326 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 ZNF212Q9UDV6 495 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 SUSD2Q9UGT4 822 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 VPS51Q9UID3 782 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 MYO6Q9UM54 1294 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 KNL1Q8NG31 2342 aa16.74■□□□□ 0.27
LSM1-201ENST00000311351 CHD5Q8TDI0 1954 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 TMCO5BA8MYB1 307 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 CCP110O43303 1012 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 ATMINO43313 823 aaPredicted RBP16.73■□□□□ 0.27
LSM1-201ENST00000311351 CCDC172P0C7W6 258 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 RRM1P23921 792 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 SLC8A1P32418 973 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 METAP1P53582 386 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 ATXN3P54252 364 aaPredicted RBP16.73■□□□□ 0.27
LSM1-201ENST00000311351 ELAVL3Q14576 367 aaKnown RBP16.73■□□□□ 0.27
LSM1-201ENST00000311351 ACCSLQ4AC99 568 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 PSAPL1Q6NUJ1 521 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 Q6ZVU0 165 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 USP30Q70CQ3 517 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 STRADAQ7RTN6 431 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 DNAAF5Q86Y56 855 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 MCOLN2Q8IZK6 566 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 PIP4P2Q8N4L2 257 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 SH2D3CQ8N5H7 860 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 MINDY1Q8N5J2 469 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 AADATQ8N5Z0 425 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 CENPIQ92674 756 aaPredicted RBP16.73■□□□□ 0.27
LSM1-201ENST00000311351 MCEEQ96PE7 176 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 SGK2Q9HBY8 427 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 TMEM51Q9NW97 253 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 NEU3Q9UQ49 428 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.73■□□□□ 0.27
LSM1-201ENST00000311351 TMEM131Q92545 1883 aa16.73■□□□□ 0.27
LSM1-201ENST00000311351 A0A1B0GTW7 788 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 FAM47DPA6NHR8 397 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 FAM72CH0Y354 149 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 K7ERQ8 282 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 PLK4O00444 970 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 ARHGAP33O14559 1287 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 GIPC1O14908 333 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 ATP9BO43861 1147 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 BNIP3LO60238 219 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 RNASEH2AO75792 299 aaKnown RBP16.72■□□□□ 0.27
LSM1-201ENST00000311351 FSBPO95073 299 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 KCNK5O95279 499 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 MT-CO1P00395 513 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 IL1BP01584 269 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 SRCP12931 536 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 GNSP15586 552 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 TNFAIP3P21580 790 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 GLDCP23378 1020 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 OR1E1P30953 314 aa16.72■□□□□ 0.27
LSM1-201ENST00000311351 ADRA1BP35368 520 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms