RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 DMAP1Q9NPF5 467 aaPredicted RBP11.79□□□□□ -0.52
PTPN2-201ENST00000309660 EIF2B3Q9NR50 452 aaKnown RBP11.79□□□□□ -0.52
PTPN2-201ENST00000309660 MPP6Q9NZW5 540 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 DCDC2Q9UHG0 476 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 LNPEPQ9UIQ6 1025 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 GPR182O15218 404 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 DNAJC6O75061 913 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 DUSP11O75319 330 aaKnown RBP11.79□□□□□ -0.52
PTPN2-201ENST00000309660 FGF3P11487 239 aaPredicted RBP11.79□□□□□ -0.52
PTPN2-201ENST00000309660 CPA3P15088 417 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 PPIDQ08752 370 aaKnown RBP11.79□□□□□ -0.52
PTPN2-201ENST00000309660 CRHR2Q13324 411 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 PRPSAP1Q14558 356 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 UPP1Q16831 310 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 MUM1Q2TAK8 710 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 ACSBG2Q5FVE4 666 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 SPANXN3Q5MJ09 141 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 MBLAC2Q68D91 279 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 ITPRIPL1Q6GPH6 555 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 NMRK2Q9NPI5 230 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 PRG3Q9Y2Y8 225 aaPredicted RBP11.79□□□□□ -0.52
PTPN2-201ENST00000309660 SHROOM3Q8TF72 1996 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 UNCXA6NJT0 531 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 F9P00740 461 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 PDHA1P08559 390 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 PTDSS1P48651 473 aaKnown RBP11.79□□□□□ -0.52
PTPN2-201ENST00000309660 PGFP49763 221 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 ARPP19P56211 112 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 ITKQ08881 620 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 PEX6Q13608 980 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 TEDDM1Q5T9Z0 273 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 ATPAF2Q8N5M1 289 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 GPR152Q8TDT2 470 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 APBB2Q92870 758 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 NTAN1Q96AB6 310 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 CCDC124Q96CT7 223 aaKnown RBP11.79□□□□□ -0.52
PTPN2-201ENST00000309660 SLC9A7Q96T83 725 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 CPNE1Q99829 537 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 COPG2Q9UBF2 871 aa11.79□□□□□ -0.52
PTPN2-201ENST00000309660 NEMP1O14524 444 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 TRAFD1O14545 582 aaPredicted RBP11.78□□□□□ -0.52
PTPN2-201ENST00000309660 HNRNPCL1O60812 293 aaKnown RBP11.78□□□□□ -0.52
PTPN2-201ENST00000309660 ZMPSTE24O75844 475 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 CTGFP29279 349 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 EPHB1P54762 984 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 TFAP2DQ7Z6R9 452 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 SPATA2LQ8IUW3 424 aaPredicted RBP11.78□□□□□ -0.52
PTPN2-201ENST00000309660 HIPK4Q8NE63 616 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 MICAL1Q8TDZ2 1067 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 MYCBPQ99417 103 aaPredicted RBP11.78□□□□□ -0.52
PTPN2-201ENST00000309660 GORASP1Q9BQQ3 440 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 RTP3Q9BQQ7 232 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 GBA3Q9H227 469 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 CXorf56Q9H5V9 222 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 TASP1Q9H6P5 420 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 GABRQQ9UN88 632 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 PTCH2Q9Y6C5 1203 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 GOLGA8QA0A0J9YX86 632 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 GOLGA8OA6NCC3 632 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 GOLGA8NF8WBI6 632 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 BIRC5O15392 142 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 SERPINE1P05121 402 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 ASGR1P07306 291 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 TSPY1Q01534 308 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 EML3Q32P44 896 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 C17orf99Q6UX52 265 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 PNPLA1Q8N8W4 532 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 RBBP8Q99708 897 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 SENP6Q9GZR1 1112 aaPredicted RBP11.78□□□□□ -0.52
PTPN2-201ENST00000309660 TRMT13Q9NUP7 481 aaKnown RBP11.78□□□□□ -0.52
PTPN2-201ENST00000309660 NDFIP2Q9NV92 336 aa11.78□□□□□ -0.52
PTPN2-201ENST00000309660 HHLA1C9JL84 531 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 E9PBE3 544 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 NCAM2O15394 837 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 KLHL41O60662 606 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 SNNO75324 88 aaPredicted RBP11.77□□□□□ -0.52
PTPN2-201ENST00000309660 UPP2O95045 317 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 VAPBO95292 243 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 BAG2O95816 211 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 C2P06681 752 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 SLC25A3Q00325 362 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 CTBP1Q13363 440 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 ZNF460Q14592 562 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 USP10Q14694 798 aaKnown RBP11.77□□□□□ -0.52
PTPN2-201ENST00000309660 INTS6LQ5JSJ4 861 aaKnown RBP11.77□□□□□ -0.52
PTPN2-201ENST00000309660 WASHC2DQ5SRD0 308 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 GRTP1Q5TC63 336 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 TIFABQ6ZNK6 161 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 RASAL3Q86YV0 1011 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 EFCAB3Q8N7B9 438 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 CNTD1Q8N815 330 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 SOCS4Q8WXH5 440 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 TRIB2Q92519 343 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 SGF29Q96ES7 293 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 VPS39Q96JC1 886 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 FICDQ9BVA6 458 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 FSD1LQ9BXM9 530 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 ZFYVE28Q9HCC9 887 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 TLK1Q9UKI8 766 aa11.77□□□□□ -0.52
PTPN2-201ENST00000309660 GIT1Q9Y2X7 761 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms