RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 GJB3O75712 270 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 AP1G2O75843 785 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 ENDOD1O94919 500 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 UNC5CO95185 931 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 IGHDP01880 384 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 KLKB1P03952 638 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 PDHA1P08559 390 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 CPB1P15086 417 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 CAPN2P17655 700 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 XBP1P17861 261 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 PKLRP30613 574 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 ELF1P32519 619 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 GRK6P43250 576 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 MAGEA8P43361 318 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 DNA2P51530 1060 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 GEMIN4P57678 1058 aaKnown RBP1.29□□□□□ -2.2
CEP290-201ENST00000309041 NXPH1P58417 271 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 SIRPAP78324 504 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 CDC42EP1Q00587 391 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 GFPT1Q06210 699 aaPredicted RBP1.29□□□□□ -2.2
CEP290-201ENST00000309041 ITGA7Q13683 1181 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 C16orf72Q14CZ0 275 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 TTF1Q15361 905 aaPredicted RBP1.29□□□□□ -2.2
CEP290-201ENST00000309041 CYBRD1Q53TN4 286 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 INO80DQ53TQ3 878 aaPredicted RBP1.29□□□□□ -2.2
CEP290-201ENST00000309041 FGD3Q5JSP0 725 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 IKBIPQ70UQ0 350 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 KIAA0319LQ8IZA0 1049 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 C10orf53Q8N6V4 93 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 C15orf54Q8N8G6 183 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 FADS6Q8N9I5 356 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 OR4D10Q8NGI6 311 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 RPLP0P6Q8NHW5 317 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 FCAMRQ8WWV6 532 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 MIEF2Q96C03 454 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 SPACA7Q96KW9 195 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 NSUN5Q96P11 429 aaKnown RBP1.29□□□□□ -2.2
CEP290-201ENST00000309041 GBP4Q96PP9 640 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 HIST1H2AAQ96QV6 131 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 RBBP8Q99708 897 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 SH3GL3Q99963 347 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 GAL3ST1Q99999 423 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 TCHPQ9BT92 498 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 PAGR1Q9BTK6 254 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 NUP58Q9BVL2 599 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 KRTAP3-3Q9BYR6 98 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 KRTAP3-2Q9BYR7 98 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 BCO2Q9BYV7 579 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 KANSL2Q9H9L4 492 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 KCNK13Q9HB14 408 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 CDHR5Q9HBB8 845 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 BARX1Q9HBU1 254 aaPredicted RBP1.29□□□□□ -2.2
CEP290-201ENST00000309041 DLL4Q9NR61 685 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 WHRNQ9P202 907 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 APEX2Q9UBZ4 518 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 FHOD3Q2V2M9 1422 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 KDM3AQ9Y4C1 1321 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 CCDC78A2IDD5 438 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 GTPBP10A4D1E9 387 aaKnown RBP1.29□□□□□ -2.2
CEP290-201ENST00000309041 GOLGA8IPA6NC78 632 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 PLK4O00444 970 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 NVLO15381 856 aaKnown RBP1.29□□□□□ -2.2
CEP290-201ENST00000309041 ZBTB24O43167 697 aaPredicted RBP1.29□□□□□ -2.2
CEP290-201ENST00000309041 RGS14O43566 566 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 SEMA7AO75326 666 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 KNG1P01042 644 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 CKMP06732 381 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 ZDHHC11BP0C7U3 371 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 SLC9A1P19634 815 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 CERS1P27544 350 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 MAPK4P31152 587 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 CASP3P42574 277 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 HLCSP50747 726 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 ZNF445P59923 1031 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 ERVFC1P60507 584 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 DCAF7P61962 342 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 IRX1P78414 480 aaPredicted RBP1.29□□□□□ -2.2
CEP290-201ENST00000309041 DLK1P80370 383 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 FANCCQ00597 558 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 KLC1Q07866 573 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 PEX6Q13608 980 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 AUHQ13825 339 aaKnown RBP1.29□□□□□ -2.2
CEP290-201ENST00000309041 DOC2BQ14184 412 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 MYBPC2Q14324 1141 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 LASP1Q14847 261 aaKnown RBP1.29□□□□□ -2.2
CEP290-201ENST00000309041 TBR1Q16650 682 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 GAB4Q2WGN9 574 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 USP41Q3LFD5 358 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 TMEM41BQ5BJD5 291 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 CDCA2Q69YH5 1023 aaPredicted RBP1.29□□□□□ -2.2
CEP290-201ENST00000309041 CEP128Q6ZU80 1094 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 TMUB2Q71RG4 321 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 TRMT1LQ7Z2T5 733 aaKnown RBP1.29□□□□□ -2.2
CEP290-201ENST00000309041 ATG9AQ7Z3C6 839 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 BIVMQ86UB2 503 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 DCP1BQ8IZD4 617 aaKnown RBP1.29□□□□□ -2.2
CEP290-201ENST00000309041 FAM47BQ8NA70 645 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 KCNH5Q8NCM2 988 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 ZNF280CQ8ND82 737 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 ANKRD20A12PQ8NF67 263 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms