RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 EPHA5P54756 1037 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 BASP1P80723 227 aaKnown RBP7.14□□□□□ -1.27
PTCD2-201ENST00000308077 MORF4L2Q15014 288 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 C5orf22Q49AR2 442 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 ANKRD20A2Q5SQ80 823 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 SYCP2LQ5T4T6 812 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 ANKRD20A1Q5TYW2 823 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 ANKRD20A3Q5VUR7 823 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 PDE12Q6L8Q7 609 aaKnown RBP7.14□□□□□ -1.27
PTCD2-201ENST00000308077 LRRC31Q6UY01 552 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 CCDC25Q86WR0 208 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 PPIL6Q8IXY8 311 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 LGI2Q8N0V4 545 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 ELMOD1Q8N336 334 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 ZCCHC9Q8N567 271 aaKnown RBP7.14□□□□□ -1.27
PTCD2-201ENST00000308077 MAB21L3Q8N8X9 362 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 SHKBP1Q8TBC3 707 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 ZSCAN18Q8TBC5 510 aaPredicted RBP7.14□□□□□ -1.27
PTCD2-201ENST00000308077 ARNTL2Q8WYA1 636 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 PRICKLE1Q96MT3 831 aaPredicted RBP7.14□□□□□ -1.27
PTCD2-201ENST00000308077 RPRD1AQ96P16 312 aaPredicted RBP7.14□□□□□ -1.27
PTCD2-201ENST00000308077 ATXN3LQ9H3M9 355 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 ASAH2Q9NR71 780 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 TMEM248Q9NWD8 314 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 SEPT10Q9P0V9 454 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 DNMT3BQ9UBC3 853 aaKnown RBP7.14□□□□□ -1.27
PTCD2-201ENST00000308077 AGO1Q9UL18 857 aaKnown RBP7.14□□□□□ -1.27
PTCD2-201ENST00000308077 SHOC2Q9UQ13 582 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 HCFC2Q9Y5Z7 792 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 CPQQ9Y646 472 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 PTPRZ1P23471 2315 aaPredicted RBP7.14□□□□□ -1.27
PTCD2-201ENST00000308077 MYO18AQ92614 2054 aaKnown RBP7.14□□□□□ -1.27
PTCD2-201ENST00000308077 A0A0A0MRY4 1105 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 F5H423 210 aaPredicted RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 GOLGA8MH3BSY2 632 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 TRDMT1O14717 391 aaKnown RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 SCAMP3O14828 347 aaKnown RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 C1RP00736 705 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 HDCP19113 662 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 MX2P20592 715 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 PTPN3P26045 913 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 CDC25CP30307 473 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 HOXA9P31269 272 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 HARS2P49590 506 aaKnown RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 PMS2P54278 862 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 ZBTB17Q13105 803 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 SLC5A9Q2M3M2 681 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 PPP2R2DQ66LE6 453 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 Q6ZNB5 142 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 HOOK3Q86VS8 718 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 IQCKQ8N0W5 287 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 ZNF567Q8N184 647 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 CFAP52Q8N1V2 620 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 UMODL1-AS1Q8N2C9 162 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 LZTR1Q8N653 840 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 MRPS31Q92665 395 aaKnown RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 AZIN2Q96A70 460 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 ZNF707Q96C28 371 aaPredicted RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 ZNF419Q96HQ0 510 aaPredicted RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 SPATA13Q96N96 652 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 ZIM3Q96PE6 472 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 SEMA4AQ9H3S1 761 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 ETNK1Q9HBU6 452 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 RAB6BQ9NRW1 208 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 C2orf16Q68DN1 1984 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 CDH23Q9H251 3354 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 CLUHO75153 1309 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 PRR23AA6NEV1 266 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 F5H5T6 163 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 RFXAPO00287 272 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 CHADO15335 359 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 MAFKO60675 156 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 BANF1O75531 89 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 RHOP08100 348 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 CD68P34810 354 aaPredicted RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 ACTN2P35609 894 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 MAGEA6P43360 314 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 SLC11A2P49281 568 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 PAPOLAP51003 745 aaKnown RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 RPS24P62847 133 aaKnown RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 NTHL1P78549 312 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 SLC7A9P82251 487 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 MTA1Q13330 715 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 FASTKD3Q14CZ7 662 aaKnown RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 RAB30Q15771 203 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 FNBP1LQ5T0N5 605 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 ACBD5Q5T8D3 534 aaPredicted RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 RTL10Q7L3V2 364 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 PCGF5Q86SE9 256 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 CCDC13Q8IYE1 715 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 ATPAF2Q8N5M1 289 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 VN1R2Q8NFZ6 395 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 UBLCP1Q8WVY7 318 aaPredicted RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 RMDN1Q96DB5 314 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 TSGA13Q96PP4 275 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 GORASP1Q9BQQ3 440 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 WDR83Q9BRX9 315 aaKnown RBP7.13□□□□□ -1.27
PTCD2-201ENST00000308077 SLC46A2Q9BY10 475 aa7.13□□□□□ -1.27
PTCD2-201ENST00000308077 BRD8Q9H0E9 1235 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms