RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 NLRP14Q86W24 1093 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 TMEM139Q8IV31 216 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 RTL3Q8N8U3 475 aaKnown RBP11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 KDM1BQ8NB78 822 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ACRBPQ8NEB7 543 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 HMGB4Q8WW32 186 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 CALR3Q96L12 384 aaKnown RBP11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 FEM1AQ9BSK4 669 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SPON2Q9BUD6 331 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 FBRSQ9HAH7 460 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ATP13A1Q9HD20 1204 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 POLR3BQ9NW08 1133 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 C2orf42Q9NWW7 574 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 SUN2Q9UH99 717 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 HCN2Q9UL51 889 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 NEU3Q9UQ49 428 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ERVW-1Q9UQF0 538 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 RAD54BQ9Y620 910 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 THADAQ6YHU6 1953 aa11.28□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 ANKRD36A6QL64 1941 aa11.27□□□□□ -0.6
CSPG4P1Y-201ENST00000306641 RALGAPA1Q6GYQ0 2036 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CCDC163A0A0D9SF12 145 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 WASH4PA8MWX3 477 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 WASH3PC4AMC7 463 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CBX4O00257 560 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ARHGAP6O43182 974 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 RARAP10276 462 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CHRM1P11229 460 aaPredicted RBP11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 TDGF1P13385 188 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 HLA-EP13747 358 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 GOT1P17174 413 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 HOXA6P31267 233 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 SLC1A1P43005 524 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CTSOP43234 321 aaPredicted RBP11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 PXNP49023 591 aaPredicted RBP11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CDH6P55285 790 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ENPP2Q13822 863 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 POLD3Q15054 466 aaPredicted RBP11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 TCEAL1Q15170 157 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 DPYSL2Q16555 572 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CA9Q16790 459 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 PTPRNQ16849 979 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ACCSLQ4AC99 568 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CYP4V2Q6ZWL3 525 aaPredicted RBP11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 WDR5BQ86VZ2 330 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 MAP7D3Q8IWC1 876 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ZNF366Q8N895 744 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 MDGA1Q8NFP4 955 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 OR7D4Q8NG98 312 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 OR52K2Q8NGK3 314 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ERLEC1Q96DZ1 483 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 SPACA7Q96KW9 195 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 RPL10LQ96L21 214 aaKnown RBP11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CCDC114Q96M63 670 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 MAGEB5Q9BZ81 275 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 TPSD1Q9BZJ3 242 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 MAGEH1Q9H213 219 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 FAM86C1Q9NVL1 165 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 RAPGEFL1Q9UHV5 662 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 VPS51Q9UID3 782 aa11.27□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 A0A0D9SEW6 157 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 EDDM13A0A1B0GTR0 161 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 A0A1W2PQF6 199 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 RNASEH1O60930 286 aaKnown RBP11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 PTMAP06454 111 aaKnown RBP11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ACADMP11310 421 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 TNNT1P13805 278 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 TCF4P15884 667 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CNR2P34972 360 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 SERPINB6P35237 376 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 STK19P49842 368 aaPredicted RBP11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 HADHBP55084 474 aaKnown RBP11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 GEMIN4P57678 1058 aaKnown RBP11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 YBEYP58557 167 aaPredicted RBP11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 DMWDQ09019 674 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 KIF5AQ12840 1032 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 BYSLQ13895 437 aaKnown RBP11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 IFI16Q16666 785 aaKnown RBP11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 PARP15Q460N3 678 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 USP39Q53GS9 565 aaKnown RBP11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 RETSATQ6NUM9 610 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 KIAA1324Q6UXG2 1013 aaKnown RBP11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CEP68Q76N32 757 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 POLNQ7Z5Q5 900 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 RASSF3Q86WH2 238 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ATP11CQ8NB49 1132 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 KCTD6Q8NC69 237 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ALG14Q96F25 216 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 DESI2Q9BSY9 194 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CALN1Q9BXU9 219 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 TMEM245Q9H330 911 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 PCDH18Q9HCL0 1135 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 NDFIP2Q9NV92 336 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 RCOR3Q9P2K3 495 aaPredicted RBP11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ZNF212Q9UDV6 495 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 EBF1Q9UH73 591 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 RAB23Q9ULC3 237 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 FARP1Q9Y4F1 1045 aaPredicted RBP11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 OR51B4Q9Y5P0 310 aa11.26□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 R4GN57 208 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms