RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 PRKAG1P54619 331 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 CACUL1Q86Y37 369 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 TBC1D10CQ8IV04 446 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 TEX47Q8TBZ9 253 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 ZNF285Q96NJ3 590 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 CCDC86Q9H6F5 360 aaKnown RBP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 TRNAU1APQ9NX07 287 aaKnown RBP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 MAT2BQ9NZL9 334 aa13.61□□□□□ -0.23
TRIM56-201ENST00000306085 DDX20Q9UHI6 824 aaKnown RBP13.61□□□□□ -0.23
TRIM56-201ENST00000306085 MARSP56192 900 aaKnown RBP13.6□□□□□ -0.23
TRIM56-201ENST00000306085 BNC1Q01954 994 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 MADCAM1Q13477 382 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 EMC2Q15006 297 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 TYSND1Q2T9J0 566 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 ZSWIM2Q8NEG5 633 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 KIAA0586Q9BVV6 1533 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 CKMP06732 381 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 UGT1A5P35504 534 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 GRM4Q14833 912 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 ZNHIT3Q15649 155 aaPredicted RBP13.6□□□□□ -0.23
TRIM56-201ENST00000306085 EZH2Q15910 746 aaKnown RBP13.6□□□□□ -0.23
TRIM56-201ENST00000306085 WDR93Q6P2C0 686 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 SENP6Q9GZR1 1112 aaPredicted RBP13.6□□□□□ -0.23
TRIM56-201ENST00000306085 ALG6Q9Y672 507 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 FRG1Q14331 258 aaKnown RBP13.6□□□□□ -0.23
TRIM56-201ENST00000306085 CIPCQ9C0C6 399 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 LAMC3Q9Y6N6 1575 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 KIAA0391O15091 583 aaKnown RBP13.6□□□□□ -0.23
TRIM56-201ENST00000306085 S100A3P33764 101 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 PPM1AP35813 382 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 MPP3Q13368 585 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 GGA3Q9NZ52 723 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 GARTP22102 1010 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 KCNV1Q6PIU1 500 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 CDRT15Q96T59 188 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 OR10H2O60403 315 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 IFNA16P05015 189 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 MED22Q15528 200 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 ABHD14A-ACY1A0A1B0GW23 586 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 RGSL1A5PLK6 1076 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 TSPAN3O60637 253 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 CYP4F8P98187 520 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 CXorf57Q6NSI4 855 aaKnown RBP13.6□□□□□ -0.23
TRIM56-201ENST00000306085 NOTUMQ6P988 496 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 SLFN11Q7Z7L1 901 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 VPS4BO75351 444 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 PPM1BO75688 479 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 MTA2O94776 668 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 MAN2A2P49641 1150 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 DEFA5Q01523 94 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 QRICH1Q2TAL8 776 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 ANKRD26P1Q6NSI1 321 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 FAM98AQ8NCA5 519 aaKnown RBP13.6□□□□□ -0.23
TRIM56-201ENST00000306085 S100PBPQ96BU1 408 aa13.6□□□□□ -0.23
TRIM56-201ENST00000306085 DCXO43602 365 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 CDC42EP1Q00587 391 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 SPP2Q13103 211 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 TMEM121Q9BTD3 319 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 SUCOQ9UBS9 1254 aaKnown RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 USP11P51784 963 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 SLC9A4Q6AI14 798 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 TPCN2Q8NHX9 752 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 NAT14Q8WUY8 206 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 C11orf24Q96F05 449 aaPredicted RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 ORAI2Q96SN7 254 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 TMEM8AQ9HCN3 771 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 NKIRAS2Q9NYR9 191 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 PSMD13Q9UNM6 376 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 PRELID1Q9Y255 219 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 TRIM17Q9Y577 477 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 ZNF318Q5VUA4 2279 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 A0A088AWK7 358 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 GSAPA4D1B5 854 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 ZNF10P21506 573 aaPredicted RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 ME2P23368 584 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 WASHC2DQ5SRD0 308 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 EXOC2Q96KP1 924 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 WDR12Q9GZL7 423 aaKnown RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 POMKQ9H5K3 350 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 GGA2Q9UJY4 613 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 ZNF214Q9UL59 606 aaPredicted RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 UBQLN1Q9UMX0 589 aaKnown RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 PLEKP08567 350 aaPredicted RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 PLK1P53350 603 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 GIPC3Q8TF64 312 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 PTCD2Q8WV60 388 aaKnown RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 MROH7-TTC4A0A0A0MT08 1334 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 IST1P53990 364 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 EFEMP1Q12805 493 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 TOP3AQ13472 1001 aaPredicted RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 BMPR2Q13873 1038 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 PIK3R3Q92569 461 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 H7C1W4 665 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 GTPBP1O00178 669 aaKnown RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 MTMR2Q13614 643 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 GPR107Q5VW38 600 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 IFT46Q9NQC8 304 aa13.59□□□□□ -0.23
TRIM56-201ENST00000306085 RSL24D1Q9UHA3 163 aaKnown RBP13.59□□□□□ -0.23
TRIM56-201ENST00000306085 OR10H1Q9Y4A9 318 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms