RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 ATG2AQ2TAZ0 1938 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 NYNRINQ9P2P1 1898 aaKnown RBP13.29□□□□□ -0.28
CCDC7-202ENST00000302316 CDH23Q9H251 3354 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 AGPSO00116 658 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 RIPK2O43353 540 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 JCHAINP01591 159 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 DDX6P26196 483 aaKnown RBP eCLIP13.29□□□□□ -0.28
CCDC7-202ENST00000302316 MAGEA4P43358 317 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 LMAN1P49257 510 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 SGSHP51688 502 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 NTHL1P78549 312 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 PDIA2Q13087 525 aaKnown RBP13.29□□□□□ -0.28
CCDC7-202ENST00000302316 POLD3Q15054 466 aaPredicted RBP13.29□□□□□ -0.28
CCDC7-202ENST00000302316 DUSP6Q16828 381 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 SLC5A9Q2M3M2 681 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 PARP6Q2NL67 630 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 TEX44Q53QW1 395 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 HSP90B2PQ58FF3 399 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 UBAP2Q5T6F2 1119 aaKnown RBP13.29□□□□□ -0.28
CCDC7-202ENST00000302316 ITPRIPL1Q6GPH6 555 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 Q6ZNB5 142 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 GRASPQ7Z6J2 395 aaPredicted RBP13.29□□□□□ -0.28
CCDC7-202ENST00000302316 ZBED8Q8IZ13 594 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 PDIK1LQ8N165 341 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 USP33Q8TEY7 942 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 C9orf72Q96LT7 481 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 PHACTR1Q9C0D0 580 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 NINJ2Q9NZG7 142 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 IGSF9Q9P2J2 1179 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 RSPH14Q9UHP6 348 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 TRHDEQ9UKU6 1024 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 SHROOM3Q8TF72 1996 aa13.29□□□□□ -0.28
CCDC7-202ENST00000302316 MATN3O15232 486 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 ZBTB24O43167 697 aaPredicted RBP13.28□□□□□ -0.28
CCDC7-202ENST00000302316 GREM1O60565 184 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 MOSPD3O75425 235 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 CLDN11O75508 207 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 ACSL3O95573 720 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 CCNB1P14635 433 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 TPSB2P20231 275 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 AVPR1AP37288 418 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 YBEYP58557 167 aaPredicted RBP13.28□□□□□ -0.28
CCDC7-202ENST00000302316 IFI35P80217 286 aaPredicted RBP13.28□□□□□ -0.28
CCDC7-202ENST00000302316 MTM1Q13496 603 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 TPSAB1Q15661 275 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 ANO4Q32M45 955 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 PARP15Q460N3 678 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 FNBP1LQ5T0N5 605 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 TTC39BQ5VTQ0 682 aaPredicted RBP13.28□□□□□ -0.28
CCDC7-202ENST00000302316 LRIG3Q6UXM1 1119 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 RELL1Q8IUW5 271 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 OR2W6PQ8NHA6 318 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 ZNF707Q96C28 371 aaPredicted RBP13.28□□□□□ -0.28
CCDC7-202ENST00000302316 TEKT5Q96M29 485 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 SERPINB12Q96P63 405 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 SMG9Q9H0W8 520 aaKnown RBP13.28□□□□□ -0.28
CCDC7-202ENST00000302316 GBA3Q9H227 469 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 RETREG1Q9H6L5 497 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 TASP1Q9H6P5 420 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 SP110Q9HB58 689 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 FAM53CQ9NYF3 392 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 TRANK1O15050 2925 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 A0A1B0GVM2 712 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 TYW5A2RUC4 315 aaKnown RBP13.28□□□□□ -0.28
CCDC7-202ENST00000302316 TCAF2A6NFQ2 919 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 LEFTY2O00292 366 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 BANF1O75531 89 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 NEBLO76041 1014 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 POU2F2P09086 479 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 IFFO1Q0D2I5 559 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 SLC29A2Q14542 456 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 FASTKD3Q14CZ7 662 aaKnown RBP13.28□□□□□ -0.28
CCDC7-202ENST00000302316 KYNUQ16719 465 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 HP1BP3Q5SSJ5 553 aaPredicted RBP13.28□□□□□ -0.28
CCDC7-202ENST00000302316 CHST9Q7L1S5 443 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 TDHQ8IZJ6 230 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 CMTM8Q8IZV2 173 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 KRT222Q8N1A0 295 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 GOLGA6L1Q8N7Z2 621 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 UHMK1Q8TAS1 419 aaKnown RBP13.28□□□□□ -0.28
CCDC7-202ENST00000302316 FRMD8Q9BZ67 464 aaPredicted RBP13.28□□□□□ -0.28
CCDC7-202ENST00000302316 PIDD1Q9HB75 910 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 ARHGAP26Q9UNA1 814 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 ZNF510Q9Y2H8 683 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 TTLL3Q9Y4R7 772 aa13.28□□□□□ -0.28
CCDC7-202ENST00000302316 RFXAPO00287 272 aa13.27□□□□□ -0.28
CCDC7-202ENST00000302316 EIF3HO15372 352 aaKnown RBP eCLIP13.27□□□□□ -0.28
CCDC7-202ENST00000302316 TTC4O95801 387 aa13.27□□□□□ -0.28
CCDC7-202ENST00000302316 NUDT17P0C025 328 aa13.27□□□□□ -0.28
CCDC7-202ENST00000302316 NFKB1P19838 968 aa13.27□□□□□ -0.28
CCDC7-202ENST00000302316 CD68P34810 354 aaPredicted RBP13.27□□□□□ -0.28
CCDC7-202ENST00000302316 ACVRL1P37023 503 aa13.27□□□□□ -0.28
CCDC7-202ENST00000302316 BBS9Q3SYG4 887 aa13.27□□□□□ -0.28
CCDC7-202ENST00000302316 MSS51Q4VC12 460 aa13.27□□□□□ -0.28
CCDC7-202ENST00000302316 PRSS36Q5K4E3 855 aa13.27□□□□□ -0.28
CCDC7-202ENST00000302316 C6orf118Q5T5N4 469 aa13.27□□□□□ -0.28
CCDC7-202ENST00000302316 HTR3DQ70Z44 454 aa13.27□□□□□ -0.28
CCDC7-202ENST00000302316 ANKMY2Q8IV38 441 aa13.27□□□□□ -0.28
CCDC7-202ENST00000302316 C12orf76Q8N812 135 aaPredicted RBP13.27□□□□□ -0.28
CCDC7-202ENST00000302316 PDCD7Q8N8D1 485 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms