RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 POC1B-GALNT4F8VUJ3 575 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 KCNK1O00180 336 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 MATN3O15232 486 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 LILRB3O75022 631 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 SEC24AO95486 1093 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 AP2A1O95782 977 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 MOCS2O96007 188 aaPredicted RBP12.28□□□□□ -0.44
TPM3-202ENST00000302206 HMGA1P17096 107 aaKnown RBP12.28□□□□□ -0.44
TPM3-202ENST00000302206 RPL17P18621 184 aaKnown RBP12.28□□□□□ -0.44
TPM3-202ENST00000302206 ATP5C1P36542 298 aaKnown RBP12.28□□□□□ -0.44
TPM3-202ENST00000302206 MSH2P43246 934 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 ALDH1A3P47895 512 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 PLD1Q13393 1074 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 PRPSAP1Q14558 356 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 VEPH1Q14D04 833 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 ANO4Q32M45 955 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 C5orf22Q49AR2 442 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 HECTD3Q5T447 861 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 KCTD11Q693B1 232 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 ZNF449Q6P9G9 518 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 TRABD2AQ86V40 505 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 CYP4X1Q8N118 509 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 PDCD7Q8N8D1 485 aaKnown RBP12.28□□□□□ -0.44
TPM3-202ENST00000302206 PLD4Q96BZ4 506 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 YME1L1Q96TA2 773 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 SELENOSQ9BQE4 189 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 SLC39A8Q9C0K1 460 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 MRPL17Q9NRX2 175 aaKnown RBP12.28□□□□□ -0.44
TPM3-202ENST00000302206 UXTQ9UBK9 157 aaPredicted RBP12.28□□□□□ -0.44
TPM3-202ENST00000302206 CTNNAL1Q9UBT7 734 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 RSPH14Q9UHP6 348 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 TTLL3Q9Y4R7 772 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 YIPF1Q9Y548 306 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 PCDHB12Q9Y5F1 795 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 PCDHA11Q9Y5I1 949 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 DFFAO00273 331 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 C2CD2LO14523 706 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 ZBTB24O43167 697 aaPredicted RBP12.27□□□□□ -0.45
TPM3-202ENST00000302206 MAFKO60675 156 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 AVILO75366 819 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 FAM155BO75949 473 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 TBX18O95935 607 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 C1QAP02745 245 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 PYGBP11216 843 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 CHN1P15882 459 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 CD68P34810 354 aaPredicted RBP12.27□□□□□ -0.45
TPM3-202ENST00000302206 MAPKAPK2P49137 400 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 TNK2Q07912 1038 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 ZBTB17Q13105 803 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 NAB1Q13506 487 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 FRG1Q14331 258 aaKnown RBP12.27□□□□□ -0.45
TPM3-202ENST00000302206 TMED2Q15363 201 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 ARMC3Q5W041 872 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 NETO2Q8NC67 525 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 GSDMBQ8TAX9 411 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 DCAKDQ8WVC6 231 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 SLC44A1Q8WWI5 657 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 TIFAQ96CG3 184 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 STAMBPL1Q96FJ0 436 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 CFAP36Q96G28 342 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 CELF6Q96J87 481 aaKnown RBP12.27□□□□□ -0.45
TPM3-202ENST00000302206 PAFAH2Q99487 392 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 GORASP1Q9BQQ3 440 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 CCSER2Q9H7U1 834 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 LRRC40Q9H9A6 602 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 CYP4F11Q9HBI6 524 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 CASS4Q9NQ75 786 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 INTS9Q9NV88 658 aaKnown RBP12.27□□□□□ -0.45
TPM3-202ENST00000302206 TRPM5Q9NZQ8 1165 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 ZNF180Q9UJW8 692 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 MAGED2Q9UNF1 606 aaPredicted RBP12.27□□□□□ -0.45
TPM3-202ENST00000302206 SMG5Q9UPR3 1016 aaKnown RBP12.27□□□□□ -0.45
TPM3-202ENST00000302206 HCN4Q9Y3Q4 1203 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 ASB3Q9Y575 518 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 BDP1A6H8Y1 2624 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 XIRP2A4UGR9 3374 aa12.27□□□□□ -0.45
TPM3-202ENST00000302206 KIAA1671Q9BY89 1806 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 ARHGAP42A6NI28 874 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 RASA4BC9J798 803 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 PRPF4O43172 522 aaKnown RBP eCLIP12.26□□□□□ -0.45
TPM3-202ENST00000302206 RASA4O43374 803 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 ALDH1A2O94788 518 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 GJB5O95377 273 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 JCHAINP01591 159 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 FGBP02675 491 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 ACRP10323 421 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 CCNB1P14635 433 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 BRAFP15056 766 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 PGAM1P18669 254 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 ELF1P32519 619 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 NPY2RP49146 381 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 YBEYP58557 167 aaPredicted RBP12.26□□□□□ -0.45
TPM3-202ENST00000302206 FPGSQ05932 587 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 FBXL22Q6P050 247 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 FAM117BQ6P1L5 589 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 UNC5AQ6ZN44 842 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 CAPN12Q6ZSI9 719 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 LINC00523Q86TU6 105 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 MIB1Q86YT6 1006 aa12.26□□□□□ -0.45
TPM3-202ENST00000302206 FIBCD1Q8N539 461 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms