RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 M0QZQ0 153 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 DFFAO00273 331 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 TRAFD1O14545 582 aaPredicted RBP22.42■■□□□ 1.18
TPM4-201ENST00000300933 SOAT2O75908 522 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 RTN3O95197 1032 aaPredicted RBP22.42■■□□□ 1.18
TPM4-201ENST00000300933 GRK4P32298 578 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 CTC1Q2NKJ3 1217 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 FYB2Q5VWT5 728 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 CES4AQ5XG92 561 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 C16orf46Q6P387 395 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 LRRC8BQ6P9F7 803 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 ZNF598Q86UK7 904 aaKnown RBP22.42■■□□□ 1.18
TPM4-201ENST00000300933 SPATA2LQ8IUW3 424 aaPredicted RBP22.42■■□□□ 1.18
TPM4-201ENST00000300933 DNAAF3Q8N9W5 541 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 LINC01599Q8WXQ3 324 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 NTAN1Q96AB6 310 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 SLC9A7Q96T83 725 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 NMUR1Q9HB89 426 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 NDFIP2Q9NV92 336 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 MOCS1Q9NZB8 636 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 LRCH1Q9Y2L9 728 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 GOLGA8TH3BQL2 631 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 ATP9BO43861 1147 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 LMNAP02545 664 aaKnown RBP22.42■■□□□ 1.18
TPM4-201ENST00000300933 SERPINB4P48594 390 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 CERCAMQ5T4B2 595 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 PM20D1Q6GTS8 502 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 OTOP3Q7RTS5 596 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 TTC9BQ8N6N2 239 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 CASP10Q92851 521 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 AZIN2Q96A70 460 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 PRR11Q96HE9 360 aaPredicted RBP22.42■■□□□ 1.18
TPM4-201ENST00000300933 FCRL3Q96P31 734 aaPredicted RBP22.42■■□□□ 1.18
TPM4-201ENST00000300933 RPS6KL1Q9Y6S9 549 aa22.42■■□□□ 1.18
TPM4-201ENST00000300933 ARPP19P56211 112 aa22.41■■□□□ 1.18
TPM4-201ENST00000300933 PPP2R5DQ14738 602 aa22.41■■□□□ 1.18
TPM4-201ENST00000300933 RGS9BPQ6ZS82 235 aa22.41■■□□□ 1.18
TPM4-201ENST00000300933 KDELC2Q7Z4H8 507 aa22.41■■□□□ 1.18
TPM4-201ENST00000300933 CCNJLQ8IV13 435 aa22.41■■□□□ 1.18
TPM4-201ENST00000300933 THEM5Q8N1Q8 247 aa22.41■■□□□ 1.18
TPM4-201ENST00000300933 PCSK9Q8NBP7 692 aaKnown RBP22.41■■□□□ 1.18
TPM4-201ENST00000300933 GYG2O15488 501 aa22.41■■□□□ 1.18
TPM4-201ENST00000300933 TBX10O75333 385 aa22.41■■□□□ 1.18
TPM4-201ENST00000300933 SKIP12755 728 aa22.41■■□□□ 1.18
TPM4-201ENST00000300933 NFKB1P19838 968 aa22.41■■□□□ 1.18
TPM4-201ENST00000300933 TSPY1Q01534 308 aa22.41■■□□□ 1.18
TPM4-201ENST00000300933 SCAPQ12770 1279 aa22.41■■□□□ 1.18
TPM4-201ENST00000300933 RNF180Q86T96 592 aa22.41■■□□□ 1.18
TPM4-201ENST00000300933 SMC1BQ8NDV3 1235 aa22.41■■□□□ 1.18
TPM4-201ENST00000300933 WDR60Q8WVS4 1066 aa22.41■■□□□ 1.18
TPM4-201ENST00000300933 MCUR1Q96AQ8 359 aa22.41■■□□□ 1.18
TPM4-201ENST00000300933 DDX50Q9BQ39 737 aaKnown RBP22.41■■□□□ 1.18
TPM4-201ENST00000300933 C2CD2LO14523 706 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 CYP11A1P05108 521 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 PBX3P40426 434 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 GATMP50440 423 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 DCLRE1AQ6PJP8 1040 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 LRRC74BQ6ZQY2 392 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 ZCCHC23Q6ZST2 131 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 EPAS1Q99814 870 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 TSSK1BQ9BXA7 367 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 VPS11Q9H270 941 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 OSER1Q9NX31 292 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 KANSL3Q9P2N6 904 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 HEY2Q9UBP5 337 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 TOMM70O94826 608 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 PPM1JQ5JR12 505 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 BTBD8Q5XKL5 378 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 GLB1LQ6UWU2 654 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 SPATA22Q8NHS9 363 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 SUSD3Q96L08 255 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 GLT1D1Q96MS3 346 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 FERMT1Q9BQL6 677 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 BTBD10Q9BSF8 475 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 TLE6Q9H808 572 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 FBXO6Q9NRD1 293 aaPredicted RBP22.4■■□□□ 1.18
TPM4-201ENST00000300933 MPP6Q9NZW5 540 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 LNPEPQ9UIQ6 1025 aa22.4■■□□□ 1.18
TPM4-201ENST00000300933 GSC2O15499 205 aa22.39■■□□□ 1.18
TPM4-201ENST00000300933 CCDC22O60826 627 aa22.39■■□□□ 1.18
TPM4-201ENST00000300933 KRT38O76015 456 aa22.39■■□□□ 1.18
TPM4-201ENST00000300933 F9P00740 461 aa22.39■■□□□ 1.18
TPM4-201ENST00000300933 DHRS4L1P0CG22 281 aa22.39■■□□□ 1.18
TPM4-201ENST00000300933 GARSP41250 739 aaKnown RBP22.39■■□□□ 1.18
TPM4-201ENST00000300933 PGGT1BP53609 377 aa22.39■■□□□ 1.18
TPM4-201ENST00000300933 SCD5Q86SK9 330 aa22.39■■□□□ 1.18
TPM4-201ENST00000300933 PGAP3Q96FM1 320 aaPredicted RBP22.39■■□□□ 1.18
TPM4-201ENST00000300933 MLPHQ9BV36 600 aaPredicted RBP22.39■■□□□ 1.18
TPM4-201ENST00000300933 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.39■■□□□ 1.18
TPM4-201ENST00000300933 PLLPQ9Y342 182 aa22.39■■□□□ 1.18
TPM4-201ENST00000300933 UBTFL6P0CB48 400 aaPredicted RBP22.39■■□□□ 1.17
TPM4-201ENST00000300933 KITP10721 976 aa22.39■■□□□ 1.17
TPM4-201ENST00000300933 PPIDQ08752 370 aaKnown RBP22.39■■□□□ 1.17
TPM4-201ENST00000300933 LGSNQ5TDP6 509 aa22.39■■□□□ 1.17
TPM4-201ENST00000300933 MFSD3Q96ES6 412 aa22.39■■□□□ 1.17
TPM4-201ENST00000300933 ZNF419Q96HQ0 510 aaPredicted RBP22.39■■□□□ 1.17
TPM4-201ENST00000300933 AGAP2Q99490 1192 aa22.39■■□□□ 1.17
TPM4-201ENST00000300933 MARCOQ9UEW3 520 aaPredicted RBP22.39■■□□□ 1.17
TPM4-201ENST00000300933 ZNF180Q9UJW8 692 aa22.39■■□□□ 1.17
TPM4-201ENST00000300933 A0A1W2PQH9 124 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms