RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 SLC11A1P49279 550 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 BST1Q10588 318 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 SEPT6Q14141 434 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 RTP2Q5QGT7 225 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 STRA8Q7Z7C7 330 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 NUP93Q8N1F7 819 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 IRGQQ8WZA9 623 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 CERS2Q96G23 380 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 DEFB118Q96PH6 123 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 IARS2Q9NSE4 1012 aaKnown RBP14.88□□□□□ -0.03
SMG8-201ENST00000300917 E9PAM4 449 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 LYPLA1O75608 230 aaPredicted RBP14.88□□□□□ -0.03
SMG8-201ENST00000300917 EOMESO95936 686 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 TROVE2P10155 538 aaKnown RBP eCLIP14.88□□□□□ -0.03
SMG8-201ENST00000300917 TYMPP19971 482 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 TAF10Q12962 218 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 TAF1BQ53T94 588 aaPredicted RBP14.88□□□□□ -0.03
SMG8-201ENST00000300917 RAP1GAP2Q684P5 730 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 DCP1BQ8IZD4 617 aaKnown RBP14.88□□□□□ -0.03
SMG8-201ENST00000300917 TNS4Q8IZW8 715 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 C10orf82Q8WW14 230 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 HDAC11Q96DB2 347 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 TEKT5Q96M29 485 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 FICDQ9BVA6 458 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 UNC93B1Q9H1C4 597 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 GBA3Q9H227 469 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 CD248Q9HCU0 757 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 RBM22Q9NW64 420 aaKnown RBP eCLIP14.88□□□□□ -0.03
SMG8-201ENST00000300917 USH1CQ9Y6N9 552 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 MOXD2PA6NHM9 499 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 ITGA2BP08514 1039 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 SELPP16109 830 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 GPNMBQ14956 572 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 N4BP2L1Q5TBK1 243 aaPredicted RBP14.88□□□□□ -0.03
SMG8-201ENST00000300917 PIK3R6Q5UE93 754 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 RNF19BQ6ZMZ0 732 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 ARID3BQ8IVW6 561 aaPredicted RBP14.88□□□□□ -0.03
SMG8-201ENST00000300917 ARHGAP12Q8IWW6 846 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 C20orf27Q9GZN8 174 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 RRN3Q9NYV6 651 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 HEY2Q9UBP5 337 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 PCDHB5Q9Y5E4 795 aa14.88□□□□□ -0.03
SMG8-201ENST00000300917 ALDH2P05091 517 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 AVPR1AP37288 418 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 PAPOLAP51003 745 aaKnown RBP14.87□□□□□ -0.03
SMG8-201ENST00000300917 PDE1CQ14123 709 aaPredicted RBP14.87□□□□□ -0.03
SMG8-201ENST00000300917 ALFQ53S48 1182 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 TTC7BQ86TV6 843 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 AGR3Q8TD06 166 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 GRAMD1AQ96CP6 724 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 TBC1D31Q96DN5 1066 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 ZCWPW1Q9H0M4 648 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 ARMCX1Q9P291 453 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 KANSL3Q9P2N6 904 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 ADAM12O43184 909 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 TOMM70O94826 608 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 RPLP2P05387 115 aaKnown RBP14.87□□□□□ -0.03
SMG8-201ENST00000300917 CHRM1P11229 460 aaPredicted RBP14.87□□□□□ -0.03
SMG8-201ENST00000300917 ALADP13716 330 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 ALDH3A1P30838 453 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 TBX4P57082 545 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 NKX3-2P78367 333 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 CDK16Q00536 496 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 CFAP52Q8N1V2 620 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 ZSCAN18Q8TBC5 510 aaPredicted RBP14.87□□□□□ -0.03
SMG8-201ENST00000300917 TRIM55Q9BYV6 548 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 CCSER2Q9H7U1 834 aa14.87□□□□□ -0.03
SMG8-201ENST00000300917 SLC12A8A0AV02 714 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 J3KR12 359 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 CCL22O00626 93 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 DNAJC6O75061 913 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 GJB3O75712 270 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 KRT16P08779 473 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 SERPINB3P29508 390 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 MNAT1P51948 309 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 SLC18A1P54219 525 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 AIF1P55008 147 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 BNIP1Q12981 228 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 ANKRD20A4Q4UJ75 823 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 RASIP1Q5U651 963 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.86□□□□□ -0.03
SMG8-201ENST00000300917 E2F7Q96AV8 911 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 TMEM120AQ9BXJ8 343 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 SMOC2Q9H3U7 446 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 LRRC40Q9H9A6 602 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 CPSF2Q9P2I0 782 aaKnown RBP14.86□□□□□ -0.03
SMG8-201ENST00000300917 ZNF180Q9UJW8 692 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 HLA-DQB2P05538 268 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 MYL2P10916 166 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 MLNP12872 115 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 RNF43Q68DV7 783 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 ITPRIPL1Q6GPH6 555 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 SPATA6LQ8N4H0 392 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 DCLK2Q8N568 766 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 BRD8Q9H0E9 1235 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 SSU72Q9NP77 194 aaKnown RBP14.86□□□□□ -0.03
SMG8-201ENST00000300917 NT5MQ9NPB1 228 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 ZFP69BQ9UJL9 534 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 NEU3Q9UQ49 428 aa14.86□□□□□ -0.03
SMG8-201ENST00000300917 CDY1Q9Y6F8 540 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms