RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 SETMARQ53H47 684 aaPredicted RBP13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 OR56A4Q8NGH8 313 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ITFG1Q8TB96 612 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 LPPQ93052 612 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CATSPERZQ9NTU4 200 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TAS2R13Q9NYV9 303 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 KLQ9UEF7 1012 aa13.8□□□□□ -0.2
CHRFAM7A-201ENST00000299847 GMFGO60234 142 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 BCL10O95999 233 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 GPR15P49685 360 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SLC6A3Q01959 620 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TGM3Q08188 693 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 STX4Q12846 297 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CCNIQ14094 377 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SLC27A1Q6PCB7 646 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 RAD21L1Q9H4I0 556 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 RIOX1Q9H6W3 641 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PCDHA3Q9Y5H8 950 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CLOCKO15516 846 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PSMA3P25788 255 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 POLD2P49005 469 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 EIF2B2P49770 351 aaKnown RBP13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ACAP1Q15027 740 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 NTRK3Q16288 839 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CRY1Q16526 586 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ATAD3BQ5T9A4 648 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 MOXD1Q6UVY6 613 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 FAM183BPQ6ZVS7 135 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 GPSM1Q86YR5 675 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TMEM132CQ8N3T6 1108 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ARRDC4Q8NCT1 418 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 DUSP9Q99956 384 aaKnown RBP13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 OMDQ99983 421 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 NMRAL1Q9HBL8 299 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ARL15Q9NXU5 204 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 WTIPA6NIX2 430 aaPredicted RBP13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PRLRP16471 622 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ZNF7P17097 686 aaPredicted RBP13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 MMP13P45452 471 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ST13P50502 369 aaKnown RBP13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PRKAA1Q13131 559 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PPM1LQ5SGD2 360 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 LRRC74BQ6ZQY2 392 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ETNK2Q9NVF9 386 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 THAP1Q9NVV9 213 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SIK3Q9Y2K2 1263 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PIRTP0C851 137 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 LRPAP1P30533 357 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CASP5P51878 434 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 MARSP56192 900 aaKnown RBP13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PFKPQ01813 784 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 DIP2AQ14689 1571 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ATP13A4Q4VNC1 1196 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CAMSAP1Q5T5Y3 1602 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 IPCEF1Q8WWN9 437 aaPredicted RBP13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 FAM237BA0A1B0GVD1 139 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 IGSF6O95976 241 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CRABP2P29373 138 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 XRCC4Q13426 336 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CNGA2Q16280 664 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 HLA-DQA1Q5Y7H0 255 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CDCA5Q96FF9 252 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ADI1Q9BV57 179 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SLC4A5Q9BY07 1137 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 GRIP2Q9C0E4 1043 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 UBA2Q9UBT2 640 aaPredicted RBP13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ADAM30Q9UKF2 790 aa13.79□□□□□ -0.2
CHRFAM7A-201ENST00000299847 LOC100506127A0A0U1RQW1 187 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TSPAN19P0C672 248 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 EPORP19235 508 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 WSCD1Q658N2 575 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ZBTB46Q86UZ6 589 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ZC3H7AQ8IWR0 971 aaKnown RBP13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 GAD1Q99259 594 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 FBXO44Q9H4M3 255 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 KLHL28Q9NXS3 571 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SMIM22K7EJ46 135 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PIGNO95427 931 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 GJB1P08034 283 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SLURP2P0DP57 97 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ITGAXP20702 1163 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 ADSLP30566 484 aaPredicted RBP13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SCNN1GP51170 649 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 LSM3P62310 102 aaKnown RBP13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 UBAP2LQ14157 1087 aaKnown RBP13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CYP4X1Q8N118 509 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 RNASE11Q8TAA1 199 aaKnown RBP13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 KANSL1LA0AUZ9 987 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 MYL12BO14950 172 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TNFSF9P41273 254 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 PSEN2P49810 448 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 BTN2A1Q7KYR7 527 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 RMND5BQ96G75 393 aaPredicted RBP13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 MYOCQ99972 504 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 TMPRSS4Q9NRS4 437 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 SLC27A5Q9Y2P5 690 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 CASZ1Q86V15 1759 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 IL1R1P14778 569 aa13.78□□□□□ -0.2
CHRFAM7A-201ENST00000299847 RENBPP51606 427 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms