RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 RPL9P32969 192 aaKnown RBP13.9□□□□□ -0.18
CDH8-201ENST00000299345 HCAR3P49019 387 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 TIGD5Q53EQ6 642 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 SNX30Q5VWJ9 437 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 MBLAC2Q68D91 279 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 LINC00523Q86TU6 105 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.9□□□□□ -0.18
CDH8-201ENST00000299345 SH3TC2Q8TF17 1288 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 FCRL3Q96P31 734 aaPredicted RBP13.9□□□□□ -0.18
CDH8-201ENST00000299345 RBBP8Q99708 897 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 TASP1Q9H6P5 420 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 CAB39LQ9H9S4 337 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 WDR6Q9NNW5 1121 aaKnown RBP13.9□□□□□ -0.18
CDH8-201ENST00000299345 GEMIN8Q9NWZ8 242 aaKnown RBP13.9□□□□□ -0.18
CDH8-201ENST00000299345 ANGPTL2Q9UKU9 493 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 GIT1Q9Y2X7 761 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 KPNA6O60684 536 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 PSMG1O95456 288 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 PGK1P00558 417 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 FYNP06241 537 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 SKIP12755 728 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 GRIK1P39086 918 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 BRCC3P46736 316 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 CDK7P50613 346 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 EPHB1P54762 984 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 SLC12A2P55011 1212 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 ABCE1P61221 599 aaKnown RBP13.89□□□□□ -0.19
CDH8-201ENST00000299345 ACSBG2Q5FVE4 666 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 INTS6LQ5JSJ4 861 aaKnown RBP13.89□□□□□ -0.19
CDH8-201ENST00000299345 TEDDM1Q5T9Z0 273 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 FSTL4Q6MZW2 842 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 KDELC2Q7Z4H8 507 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 UPF1Q92900 1129 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDH8-201ENST00000299345 APBA2Q99767 749 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 C20orf27Q9GZN8 174 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 MIOSQ9NXC5 875 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 SORCS3Q9UPU3 1222 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 DICER1Q9UPY3 1922 aaKnown RBP13.89□□□□□ -0.19
CDH8-201ENST00000299345 LOC100653049A0A140TA62 436 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 KRT34O76011 436 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 PROCP04070 461 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 MPOP05164 745 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 F7P08709 466 aaPredicted RBP13.89□□□□□ -0.19
CDH8-201ENST00000299345 LIMK2P53671 638 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 SEPT6Q14141 434 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 LIMS2Q7Z4I7 341 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 TAC4Q86UU9 113 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 POU5F2Q8N7G0 328 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 URGCPQ8TCY9 931 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 TTC1Q99614 292 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 CYP4F11Q9HBI6 524 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 CHST12Q9NRB3 414 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 MRPL42Q9Y6G3 142 aaKnown RBP13.89□□□□□ -0.19
CDH8-201ENST00000299345 MAP3K7O43318 606 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 USP1O94782 785 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 FGF3P11487 239 aaPredicted RBP13.89□□□□□ -0.19
CDH8-201ENST00000299345 SLC34A1Q06495 639 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 SCAPQ12770 1279 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 FSCBQ5H9T9 825 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 OVOS1Q6IE37 1185 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 SPATA2LQ8IUW3 424 aaPredicted RBP13.89□□□□□ -0.19
CDH8-201ENST00000299345 NPWQ8N729 165 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 ZMIZ2Q8NF64 920 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 HDAC11Q96DB2 347 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 FSD1LQ9BXM9 530 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 SOX13Q9UN79 622 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 AAR2Q9Y312 384 aaKnown RBP13.89□□□□□ -0.19
CDH8-201ENST00000299345 Q9Y3F1 56 aa13.89□□□□□ -0.19
CDH8-201ENST00000299345 MEI4A8MW99 385 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 C2P06681 752 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 GMPRP36959 345 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 COPAP53621 1224 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 CACNA2D1P54289 1103 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 ZBTB17Q13105 803 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 PCLAFQ15004 111 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 DCLRE1AQ6PJP8 1040 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 ENDOVQ8N8Q3 282 aaKnown RBP13.88□□□□□ -0.19
CDH8-201ENST00000299345 DQX1Q8TE96 717 aaKnown RBP13.88□□□□□ -0.19
CDH8-201ENST00000299345 TEKT5Q96M29 485 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 NMRAL1Q9HBL8 299 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 G3BP2Q9UN86 482 aaKnown RBP13.88□□□□□ -0.19
CDH8-201ENST00000299345 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.88□□□□□ -0.19
CDH8-201ENST00000299345 ARHGEF37A1IGU5 675 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 CDK18Q07002 472 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 ITKQ08881 620 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 IRF5Q13568 498 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 POU6F1Q14863 301 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 DLG2Q15700 870 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 OTOP3Q7RTS5 596 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 WDR60Q8WVS4 1066 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 SOCS4Q8WXH5 440 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 VPS39Q96JC1 886 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 PAAF1Q9BRP4 392 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 NSMCE4AQ9NXX6 385 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 EMCNQ9ULC0 261 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 C9IYK1 514 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 TRIM13O60858 407 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 PMPCBO75439 489 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 ANXA9O76027 345 aa13.88□□□□□ -0.19
CDH8-201ENST00000299345 CD52P31358 61 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms