RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 DNAJC14Q6Y2X3 702 aaPredicted RBP17.57■□□□□ 0.4
SHANK1-201ENST00000293441 COMMD2Q86X83 199 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 GATAD2AQ86YP4 633 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 DEFB107AQ8IZN7 70 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 DPP10Q8N608 796 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 CENPTQ96BT3 561 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 MTERF3Q96E29 417 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 PRRG3Q9BZD7 231 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 ROGDIQ9GZN7 287 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 KCNMB3Q9NPA1 279 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 DLGAP2Q9P1A6 1054 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 SERPINE1P05121 402 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 HPCAL1P37235 193 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 CEP78Q5JTW2 689 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 GLIS3Q8NEA6 775 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 MLPHQ9BV36 600 aaPredicted RBP17.57■□□□□ 0.4
SHANK1-201ENST00000293441 NOD2Q9HC29 1040 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 PALMDQ9NP74 551 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 CARNS1A5YM72 827 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 NT5C1B-RDH14C9J2C7 533 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 CYP2A13Q16696 494 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 PARP6Q2NL67 630 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 IL27RAQ6UWB1 636 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 SERPINA13PQ6UXR4 307 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 RBM43Q6ZSC3 357 aaKnown RBP17.57■□□□□ 0.4
SHANK1-201ENST00000293441 CLYBLQ8N0X4 340 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 FBXL16Q8N461 479 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 ZNF557Q8N988 423 aaPredicted RBP17.57■□□□□ 0.4
SHANK1-201ENST00000293441 DEFB118Q96PH6 123 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 FAM126AQ9BYI3 521 aaPredicted RBP17.57■□□□□ 0.4
SHANK1-201ENST00000293441 CDT1Q9H211 546 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 NINJ2Q9NZG7 142 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 DMGDHQ9UI17 866 aaKnown RBP17.57■□□□□ 0.4
SHANK1-201ENST00000293441 NDUFAF1Q9Y375 327 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 UBIAD1Q9Y5Z9 338 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 ZSCAN5DPP0CG00 497 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 SOX6P35712 828 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 ABL2P42684 1182 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 NOGQ13253 232 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 CAPSQ13938 189 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 AADACL2Q6P093 401 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 TMEM26Q6ZUK4 368 aa17.57■□□□□ 0.4
SHANK1-201ENST00000293441 GFM2Q969S9 779 aaKnown RBP17.57■□□□□ 0.4
SHANK1-201ENST00000293441 RGS14O43566 566 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 SLC41A1Q8IVJ1 513 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 APOPT1Q96IL0 206 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 VAT1Q99536 393 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 ANKDD1BA6NHY2 528 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 SMIM22K7EJ46 135 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 APOC4-APOC2K7ER74 178 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 APOC2P02655 101 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 NDUFV1P49821 464 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 CRYBB1P53674 252 aaPredicted RBP17.56■□□□□ 0.4
SHANK1-201ENST00000293441 CRADDP78560 199 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 ASB8Q9H765 288 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 VTI1BQ9UEU0 232 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 LINC00854A0A1B0GVQ3 168 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 GPR1P46091 355 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 CCR4P51679 360 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 FAAP100Q0VG06 881 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 RRP1BQ14684 758 aaKnown RBP17.56■□□□□ 0.4
SHANK1-201ENST00000293441 PLPPR4Q7Z2D5 763 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 OR52K1Q8NGK4 314 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 DNAJC18Q9H819 358 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 ACP6Q9NPH0 428 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 COPG1Q9Y678 874 aaKnown RBP17.56■□□□□ 0.4
SHANK1-201ENST00000293441 ZSCAN5CA6NGD5 496 aaPredicted RBP17.56■□□□□ 0.4
SHANK1-201ENST00000293441 SIGLEC16A6NMB1 481 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 IL1BP01584 269 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 ADH1AP07327 375 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 SPATA31D3P0C874 917 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 ETS1P14921 441 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 DGKAP23743 735 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 SERPINB3P29508 390 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 ABCG1P45844 678 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 SCARA3Q6AZY7 606 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 TYW3Q6IPR3 259 aaKnown RBP17.56■□□□□ 0.4
SHANK1-201ENST00000293441 ZCCHC23Q6ZST2 131 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 SPATA31D4Q6ZUB0 917 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 GPR141Q7Z602 305 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 PSTKQ8IV42 348 aaKnown RBP17.56■□□□□ 0.4
SHANK1-201ENST00000293441 ZBTB10Q96DT7 871 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 ENTPD4Q9Y227 616 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 TRIM13O60858 407 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 IRX1P78414 480 aaPredicted RBP17.56■□□□□ 0.4
SHANK1-201ENST00000293441 IL5RAQ01344 420 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 FAM98BQ52LJ0 330 aaKnown RBP17.56■□□□□ 0.4
SHANK1-201ENST00000293441 SYT12Q8IV01 421 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 STK40Q8N2I9 435 aa17.56■□□□□ 0.4
SHANK1-201ENST00000293441 PHGDHO43175 533 aaKnown RBP17.55■□□□□ 0.4
SHANK1-201ENST00000293441 TBC1D12O60347 775 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 DDR2Q16832 855 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 SLC45A4Q5BKX6 768 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 OSBPL6Q9BZF3 934 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 ZYG11BQ9C0D3 744 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 TAS2R14Q9NYV8 317 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 PCDHGA4Q9Y5G9 962 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 SAC3D1A6NKF1 404 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 CXCL14O95715 111 aa17.55■□□□□ 0.4
SHANK1-201ENST00000293441 EIF2S1P05198 315 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms