RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 ECT2LQ008S8 904 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 ZNF177Q13360 481 aaPredicted RBP10.06□□□□□ -0.8
CCDC58-201ENST00000291458 E2F5Q15329 346 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 CLEC16AQ2KHT3 1053 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 SLC25A52Q3SY17 297 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 TTC31Q49AM3 519 aaPredicted RBP10.06□□□□□ -0.8
CCDC58-201ENST00000291458 ACCSLQ4AC99 568 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 SH3PXD2AQ5TCZ1 1133 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 DCAF12L1Q5VU92 463 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 CXorf57Q6NSI4 855 aaKnown RBP10.06□□□□□ -0.8
CCDC58-201ENST00000291458 KIAA0907Q7Z7F0 614 aaPredicted RBP10.06□□□□□ -0.8
CCDC58-201ENST00000291458 LUZP1Q86V48 1076 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 ZNF677Q86XU0 584 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 MMAAQ8IVH4 418 aaKnown RBP10.06□□□□□ -0.8
CCDC58-201ENST00000291458 DRC7Q8IY82 874 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 ZNF557Q8N988 423 aaPredicted RBP10.06□□□□□ -0.8
CCDC58-201ENST00000291458 RXFP2Q8WXD0 754 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 MYO19Q96H55 970 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 MRGPRX3Q96LB0 322 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 ERGIC2Q96RQ1 377 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 SELENOOQ9BVL4 669 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 C6orf106Q9H6K1 298 aaPredicted RBP10.06□□□□□ -0.8
CCDC58-201ENST00000291458 TMEM9BQ9NQ34 198 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 WSB2Q9NYS7 404 aaPredicted RBP10.06□□□□□ -0.8
CCDC58-201ENST00000291458 ADAM22Q9P0K1 906 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 SLCO3A1Q9UIG8 710 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 SLC25A13Q9UJS0 675 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 PILRBQ9UKJ0 227 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 ZNF292O60281 2723 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 TMEM131Q92545 1883 aa10.06□□□□□ -0.8
CCDC58-201ENST00000291458 EDDM13A0A1B0GTR0 161 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 LRRC53A6NM62 1247 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 E9PAM4 449 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 FOXD2O60548 495 aaPredicted RBP10.05□□□□□ -0.8
CCDC58-201ENST00000291458 SNAP91O60641 907 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 RNASEH2AO75792 299 aaKnown RBP10.05□□□□□ -0.8
CCDC58-201ENST00000291458 MMP8P22894 467 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 SDC4P31431 198 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 CXCR3P49682 368 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 NOVA1P51513 510 aaKnown RBP10.05□□□□□ -0.8
CCDC58-201ENST00000291458 METAP1P53582 386 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 GFPT1Q06210 699 aaPredicted RBP10.05□□□□□ -0.8
CCDC58-201ENST00000291458 EIF4EBP2Q13542 120 aaPredicted RBP10.05□□□□□ -0.8
CCDC58-201ENST00000291458 ASIC2Q16515 512 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 DUOXA1Q1HG43 343 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 HNRNPA1L2Q32P51 320 aaKnown RBP10.05□□□□□ -0.8
CCDC58-201ENST00000291458 FILIP1LQ4L180 1135 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 BRMS1LQ5PSV4 323 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 SYCP2LQ5T4T6 812 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 TTC39BQ5VTQ0 682 aaPredicted RBP10.05□□□□□ -0.8
CCDC58-201ENST00000291458 PSAPL1Q6NUJ1 521 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 DNAJC24Q6P3W2 148 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 LRSAM1Q6UWE0 723 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 LINGO4Q6UY18 593 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 TRIM72Q6ZMU5 477 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 OR7D4Q8NG98 312 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 TTC17Q96AE7 1141 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 MCEEQ96PE7 176 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 AGPAT1Q99943 283 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 BPIFA3Q9BQP9 254 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 PABPC3Q9H361 631 aaKnown RBP10.05□□□□□ -0.8
CCDC58-201ENST00000291458 CBX8Q9HC52 389 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 ITM2CQ9NQX7 267 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 ARHGEF38Q9NXL2 777 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 RRN3Q9NYV6 651 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 TAS2R14Q9NYV8 317 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 SERGEFQ9UGK8 458 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 SUN2Q9UH99 717 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 EIF2B4Q9UI10 523 aaKnown RBP10.05□□□□□ -0.8
CCDC58-201ENST00000291458 TMEM59LQ9UK28 342 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 SLCO1B1Q9Y6L6 691 aa10.05□□□□□ -0.8
CCDC58-201ENST00000291458 SPTBN2O15020 2390 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 CFAP99D6REC4 459 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 GIPC1O14908 333 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 RNASEH1O60930 286 aaKnown RBP10.04□□□□□ -0.8
CCDC58-201ENST00000291458 ENDOD1O94919 500 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 SEMA4FO95754 770 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 IL1BP01584 269 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 CALB1P05937 261 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 FERP16591 822 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 GPD1P21695 349 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 GLDCP23378 1020 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 RRM1P23921 792 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 SCNN1AP37088 669 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 NNMTP40261 264 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 CST6Q15828 149 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 KLHL40Q2TBA0 621 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 WDR45BQ5MNZ6 344 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 C9orf64Q5T6V5 341 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 DAB2IPQ5VWQ8 1189 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 E4F1Q66K89 784 aaPredicted RBP10.04□□□□□ -0.8
CCDC58-201ENST00000291458 RWDD4Q6NW29 188 aaKnown RBP10.04□□□□□ -0.8
CCDC58-201ENST00000291458 LRRC31Q6UY01 552 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 Q6ZVU0 165 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 MON1BQ7L1V2 547 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 CCDC185Q8N715 623 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 DEFB124Q8NES8 71 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 FAM172AQ8WUF8 416 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 FOXJ1Q92949 421 aa10.04□□□□□ -0.8
CCDC58-201ENST00000291458 NAP1L5Q96NT1 182 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 704.6 ms