RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 PLA2G2CQ5R387 149 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 C9orf64Q5T6V5 341 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 TTC39BQ5VTQ0 682 aaPredicted RBP9.43□□□□□ -0.9
HMGN1-201ENST00000288344 HEATR6Q6AI08 1181 aaKnown RBP9.43□□□□□ -0.9
HMGN1-201ENST00000288344 PPP1R2P3Q6NXS1 205 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 ZC3H14Q6PJT7 736 aaKnown RBP9.43□□□□□ -0.9
HMGN1-201ENST00000288344 TRMT11Q7Z4G4 463 aaKnown RBP9.43□□□□□ -0.9
HMGN1-201ENST00000288344 KBTBD6Q86V97 674 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 CHSY1Q86X52 802 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 CHPFQ8IZ52 775 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 ZNF557Q8N988 423 aaPredicted RBP9.43□□□□□ -0.9
HMGN1-201ENST00000288344 TC2NQ8N9U0 490 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 FAM172AQ8WUF8 416 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 CYB5D2Q8WUJ1 264 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 PTPRN2Q92932 1015 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 FAM131CQ96AQ9 280 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 FAM129BQ96TA1 746 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 ACE2Q9BYF1 805 aaPredicted RBP9.43□□□□□ -0.9
HMGN1-201ENST00000288344 KLC2Q9H0B6 622 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 RETREG1Q9H6L5 497 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 NOL6Q9H6R4 1146 aaKnown RBP9.43□□□□□ -0.9
HMGN1-201ENST00000288344 CD93Q9NPY3 652 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 ITM2CQ9NQX7 267 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 PARVAQ9NVD7 372 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 COX16Q9P0S2 106 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 STIM2Q9P246 746 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 USP36Q9P275 1121 aaKnown RBP9.43□□□□□ -0.9
HMGN1-201ENST00000288344 SLCO3A1Q9UIG8 710 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 FZD10Q9ULW2 581 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.43□□□□□ -0.91e-14■■■□□ 15.4
HMGN1-201ENST00000288344 RAD54BQ9Y620 910 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 PI4KAP42356 2102 aa9.43□□□□□ -0.9
HMGN1-201ENST00000288344 CACNA1EQ15878 2313 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 THADAQ6YHU6 1953 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 A0A0D9SEW6 157 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 WASH4PA8MWX3 477 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 E9PAM4 449 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 F5H5T6 163 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 ATP9BO43861 1147 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 GFRA3O60609 400 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 CLDN11O75508 207 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 HOXB2P14652 356 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 BCKDHBP21953 392 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 SDC4P31431 198 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 L1CAMP32004 1257 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 EIF4A3P38919 411 aaKnown RBP9.42□□□□□ -0.9
HMGN1-201ENST00000288344 TCEAL1Q15170 157 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 SLC18A3Q16572 532 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 ALKBH5Q6P6C2 394 aaKnown RBP9.42□□□□□ -0.9
HMGN1-201ENST00000288344 SETD3Q86TU7 594 aaPredicted RBP9.42□□□□□ -0.9
HMGN1-201ENST00000288344 MFN1Q8IWA4 741 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 PYROXD2Q8N2H3 581 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 CARNMT1Q8N4J0 409 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 DCLK2Q8N568 766 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 TSTD1Q8NFU3 115 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 ARHGEF26Q96DR7 871 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 LOXL4Q96JB6 756 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 MCEEQ96PE7 176 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 PEBP4Q96S96 227 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 SELENOOQ9BVL4 669 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 SIK2Q9H0K1 926 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 SLC6A17Q9H1V8 727 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 MTG2Q9H4K7 406 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 PARD6AQ9NPB6 346 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 PRSS16Q9NQE7 514 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 ABHD10Q9NUJ1 306 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 MPP6Q9NZW5 540 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 OR12D3Q9UGF7 316 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 ERVW-1Q9UQF0 538 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 CEP192Q8TEP8 1941 aa9.42□□□□□ -0.9
HMGN1-201ENST00000288344 CACNA1AO00555 2505 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 IGHV1OR15-9A0A0B4J2B8 117 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 CXorf51AA0A1B0GTR3 108 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 TCRBV21S2A2A0A5A6 115 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 ILVBLA1L0T0 632 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 TMCO5BA8MYB1 307 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 CBFA2T2O43439 604 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 MFAP3LO75121 409 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 LRCH4O75427 683 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 RPP40O75818 363 aaKnown RBP9.41□□□□□ -0.9
HMGN1-201ENST00000288344 LRIG2O94898 1065 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 LCA5LO95447 670 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 MT-CO1P00395 513 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 ASLP04424 464 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 SRPRAP08240 638 aaKnown RBP9.41□□□□□ -0.9
HMGN1-201ENST00000288344 MYBL1P10243 752 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 HLA-EP13747 358 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 TCF4P15884 667 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 IL4RP24394 825 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 IL1R2P27930 398 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 GALCP54803 685 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 ADKP55263 362 aaKnown RBP9.41□□□□□ -0.9
HMGN1-201ENST00000288344 ECT2LQ008S8 904 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 SIM2Q14190 667 aaPredicted RBP9.41□□□□□ -0.9
HMGN1-201ENST00000288344 CA9Q16790 459 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 HNRNPA1L2Q32P51 320 aaKnown RBP9.41□□□□□ -0.9
HMGN1-201ENST00000288344 SPDYCQ5MJ68 293 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 ANO7Q6IWH7 933 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 DNAJC24Q6P3W2 148 aa9.41□□□□□ -0.9
HMGN1-201ENST00000288344 ZNF783Q6ZMS7 281 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms