RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PRMT7Q9NVM4 692 aaPredicted RBP13.67□□□□□ -0.22
SCAF4-201ENST00000286835 CNTN3Q9P232 1028 aa13.67□□□□□ -0.22
SCAF4-201ENST00000286835 JCHAINP01591 159 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 PRKCHP24723 683 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 KCNMB4Q86W47 210 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 NUP93Q8N1F7 819 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 CSPG4P5Q96PW8 444 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 ACE2Q9BYF1 805 aaPredicted RBP13.66□□□□□ -0.22
SCAF4-201ENST00000286835 TRPC7Q9HCX4 862 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 PIN4Q9Y237 131 aaKnown RBP13.66□□□□□ -0.22
SCAF4-201ENST00000286835 MAFBQ9Y5Q3 323 aaPredicted RBP13.66□□□□□ -0.22
SCAF4-201ENST00000286835 RGSL1A5PLK6 1076 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 HCRTO43612 131 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 CRTAMO95727 393 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 HNRNPLP14866 589 aaKnown RBP eCLIP13.66□□□□□ -0.224e-9■□□□□ 11.3
SCAF4-201ENST00000286835 PCLAFQ15004 111 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 PCSK7Q16549 785 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 CERCAMQ5T4B2 595 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 MFSD14CQ5VZR4 134 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 ZBTB49Q6ZSB9 765 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 PLD6Q8N2A8 252 aaKnown RBP13.66□□□□□ -0.22
SCAF4-201ENST00000286835 KCTD4Q8WVF5 259 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 MCRS1Q96EZ8 462 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 TBCBQ99426 244 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 XYLT2Q9H1B5 865 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 ATP6AP2A0A1C7CYW4 349 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 BCLAF3A2AJT9 711 aaKnown RBP13.66□□□□□ -0.22
SCAF4-201ENST00000286835 ATP6AP2O75787 350 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 ACAT1P24752 427 aaKnown RBP13.66□□□□□ -0.22
SCAF4-201ENST00000286835 TLR1Q15399 786 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 CCDC153Q494R4 210 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 CLVS1Q8IUQ0 354 aaPredicted RBP13.66□□□□□ -0.22
SCAF4-201ENST00000286835 ACTRT2Q8TDY3 377 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 GMLQ99445 158 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 MRPL45Q9BRJ2 306 aaKnown RBP13.66□□□□□ -0.22
SCAF4-201ENST00000286835 GATA5Q9BWX5 397 aaPredicted RBP13.66□□□□□ -0.22
SCAF4-201ENST00000286835 MINDY3Q9H8M7 445 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 NFASCO94856 1347 aa13.66□□□□□ -0.22
SCAF4-201ENST00000286835 FAM159BA6NKW6 160 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 XPOTO43592 962 aaKnown RBP13.65□□□□□ -0.22
SCAF4-201ENST00000286835 MFSD11O43934 449 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 ZNF286BP0CG31 522 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 RPL14P50914 215 aaKnown RBP13.65□□□□□ -0.22
SCAF4-201ENST00000286835 CLDN10P78369 228 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 KIZQ2M2Z5 673 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 C16orf87Q6PH81 154 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 RAET1EQ8TD07 263 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 NACA2Q9H009 215 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 STAP1Q9ULZ2 295 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 STYXL1Q9Y6J8 313 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 FARP2O94887 1054 aaPredicted RBP13.65□□□□□ -0.22
SCAF4-201ENST00000286835 LTFP02788 710 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 LSM12Q3MHD2 195 aaKnown RBP13.65□□□□□ -0.22
SCAF4-201ENST00000286835 ARL13AQ5H913 290 aaPredicted RBP13.65□□□□□ -0.22
SCAF4-201ENST00000286835 KLC3Q6P597 504 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 TTC33Q6PID6 262 aaPredicted RBP13.65□□□□□ -0.22
SCAF4-201ENST00000286835 KLHDC10Q6PID8 442 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 METTL7BQ6UX53 244 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 C4orf22Q6V702 233 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 PLEKHH3Q7Z736 793 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 TSPAN14Q8NG11 270 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 OR6P1Q8NGX9 317 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 CIB1Q99828 191 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 SIKE1Q9BRV8 207 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 ZNF670Q9BS34 389 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 CYP3A43Q9HB55 503 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 DTLQ9NZJ0 730 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 SIX4Q9UIU6 781 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 H3BSA7 217 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 PMPCBO75439 489 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 USP2O75604 605 aaPredicted RBP13.65□□□□□ -0.22
SCAF4-201ENST00000286835 ZNF280AP59817 542 aaPredicted RBP13.65□□□□□ -0.22
SCAF4-201ENST00000286835 PHEXP78562 749 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 ADIGQ0VDE8 80 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 GK3PQ14409 553 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 TEX44Q53QW1 395 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 GK5Q6ZS86 529 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 SLC2A14Q8TDB8 520 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 ATP6V1E2Q96A05 226 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 CPNE1Q99829 537 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 FSD1LQ9BXM9 530 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 PCDHAC1Q9H158 963 aa13.65□□□□□ -0.22
SCAF4-201ENST00000286835 FZD9O00144 591 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 HDAC3O15379 428 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 ZBTB14O43829 449 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 HBP1O60381 514 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 HSPA8P11142 646 aaKnown RBP13.64□□□□□ -0.23
SCAF4-201ENST00000286835 ARPP19P56211 112 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 CSHL1Q14406 222 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 ZNF460Q14592 562 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 GRTP1Q5TC63 336 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 CES4AQ5XG92 561 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 FSTL4Q6MZW2 842 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 BEST2Q8NFU1 509 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 CNDP1Q96KN2 507 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 KCTD15Q96SI1 283 aaPredicted RBP13.64□□□□□ -0.23
SCAF4-201ENST00000286835 NAT9Q9BTE0 207 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 PIF1Q9H611 641 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 PTPRHQ9HD43 1115 aa13.64□□□□□ -0.23
SCAF4-201ENST00000286835 PDLIM7Q9NR12 457 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms