RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 YKT6O15498 198 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 DAB1O75553 588 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 GRAP2O75791 330 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 CXCL10P02778 98 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 FGFR1P11362 822 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 CCDC130P13994 396 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 NPR3P17342 541 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 SYN1P17600 705 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 RPL22P35268 128 aaKnown RBP7.75□□□□□ -1.17
TRIM42-201ENST00000286349 MATKP42679 507 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 THOP1P52888 689 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 PDIA2Q13087 525 aaKnown RBP7.75□□□□□ -1.17
TRIM42-201ENST00000286349 RIPK1Q13546 671 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 SYCP2LQ5T4T6 812 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 TRNP1Q6NT89 227 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 C6orf89Q6UWU4 347 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 ZBED8Q8IZ13 594 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 SIX5Q8N196 739 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 GLIS1Q8NBF1 620 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 SLC2A14Q8TDB8 520 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 PYROXD1Q8WU10 500 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 ATXN2LQ8WWM7 1075 aaKnown RBP7.75□□□□□ -1.17
TRIM42-201ENST00000286349 CPT1BQ92523 772 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 KHSRPQ92945 711 aaKnown RBP eCLIP7.75□□□□□ -1.17
TRIM42-201ENST00000286349 MED30Q96HR3 178 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 C9orf72Q96LT7 481 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 SNRNP25Q9BV90 132 aaKnown RBP7.75□□□□□ -1.17
TRIM42-201ENST00000286349 CXCL16Q9H2A7 254 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.75□□□□□ -1.17
TRIM42-201ENST00000286349 EURLQ9NYK6 297 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 NKIRAS1Q9NYS0 192 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 NME7Q9Y5B8 376 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 DPPA5A6NC42 116 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 HACD1B0YJ81 288 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 H7C0C1 242 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 PTGESO14684 152 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 ETS1P14921 441 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 CSF2RAP15509 400 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 DDX5P17844 614 aaKnown RBP7.75□□□□□ -1.17
TRIM42-201ENST00000286349 PTPN1P18031 435 aaKnown RBP7.75□□□□□ -1.17
TRIM42-201ENST00000286349 LMO2P25791 158 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 ATP5OP48047 213 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 SEC24CP53992 1094 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 RELQ04864 619 aaPredicted RBP7.75□□□□□ -1.17
TRIM42-201ENST00000286349 SOX4Q06945 474 aaPredicted RBP7.75□□□□□ -1.17
TRIM42-201ENST00000286349 TRAP1Q12931 704 aaKnown RBP7.75□□□□□ -1.17
TRIM42-201ENST00000286349 GNA13Q14344 377 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 DSC3Q14574 896 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 ARL13BQ3SXY8 428 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 SLC25A52Q3SY17 297 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 PLEKHG4Q58EX7 1191 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 CMPK2Q5EBM0 449 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 ZC3H12BQ5HYM0 836 aaKnown RBP7.75□□□□□ -1.17
TRIM42-201ENST00000286349 SIGIRRQ6IA17 410 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 MRPL10Q7Z7H8 261 aaKnown RBP7.75□□□□□ -1.17
TRIM42-201ENST00000286349 LRRTM3Q86VH5 581 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 CACNA2D3Q8IZS8 1091 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 PLD5Q8N7P1 536 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 FAM71DQ8N9W8 422 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 DBF4BQ8NFT6 615 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 MDM1Q8TC05 714 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 LINC01599Q8WXQ3 324 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 NCSTNQ92542 709 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 BADQ92934 168 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 ITPKCQ96DU7 683 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 ZNF570Q96NI8 536 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 AIFM2Q9BRQ8 373 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 HGH1Q9BTY7 390 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 KLC2Q9H0B6 622 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 RNF39Q9H2S5 420 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 VPS37BQ9H9H4 285 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 LRRC4Q9HBW1 653 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 LRRC4CQ9HCJ2 640 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 PFDN4Q9NQP4 134 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 DNAJC17Q9NVM6 304 aaKnown RBP7.75□□□□□ -1.17
TRIM42-201ENST00000286349 SIRT5Q9NXA8 310 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 RRN3Q9NYV6 651 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 NDUFA13Q9P0J0 144 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 SAMD15Q9P1V8 674 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 CRNNQ9UBG3 495 aaPredicted RBP7.75□□□□□ -1.17
TRIM42-201ENST00000286349 ZMYND8Q9ULU4 1186 aaPredicted RBP7.75□□□□□ -1.17
TRIM42-201ENST00000286349 SMG5Q9UPR3 1016 aaKnown RBP7.75□□□□□ -1.17
TRIM42-201ENST00000286349 NAALADL1Q9UQQ1 740 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 ALPK3Q96L96 1907 aa7.75□□□□□ -1.17
TRIM42-201ENST00000286349 GOLGA8CPA6NN73 597 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 PIK3R2O00459 728 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 CBFA2T3O75081 653 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 ZBED1O96006 694 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 EIF2S1P05198 315 aaKnown RBP7.74□□□□□ -1.17
TRIM42-201ENST00000286349 LCP1P13796 627 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 PCSK1P29120 753 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 NOS2P35228 1153 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 ARL4AP40617 200 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 MTHFRP42898 656 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 RGS19P49795 217 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 ZNF135P52742 658 aaPredicted RBP7.74□□□□□ -1.17
TRIM42-201ENST00000286349 GDF10P55107 478 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 CD83Q01151 205 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 TAF5Q15542 800 aa7.74□□□□□ -1.17
TRIM42-201ENST00000286349 PDCD4Q53EL6 469 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms