RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 RTP4Q96DX8 246 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 DMAP1Q9NPF5 467 aaPredicted RBP18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 RAB6BQ9NRW1 208 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 TSC2P49815 1807 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 CXorf49A8MYA2 514 aaPredicted RBP18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 C9IYK1 514 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 F5H423 210 aaPredicted RBP18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 CREB3O43889 395 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 BPGMP07738 259 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 FAM163BP0C2L3 166 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 NCAM1P13591 858 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 TGM2P21980 687 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 CRHR1P34998 444 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 VEGFBP49765 207 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 RPS6KA3P51812 740 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 ALDH18A1P54886 795 aaKnown RBP18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 NCBP2-AS2Q69YL0 99 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 TP53INP2Q8IXH6 220 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 ZNF296Q8WUU4 475 aaPredicted RBP18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 NT5C3BQ969T7 300 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 RILPQ96NA2 401 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 TTC1Q99614 292 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 HMX1Q9NP08 348 aaPredicted RBP18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 ZDHHC7Q9NXF8 308 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 USP3Q9Y6I4 520 aa18.74■□□□□ 0.59
PDLIM3-201ENST00000284767 MOXD2PA6NHM9 499 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 PRR5-ARHGAP8B1AHC4 643 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 ZBED1O96006 694 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 APOEP02649 317 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 PCSK1P29120 753 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 MAGEA6P43360 314 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 CDK7P50613 346 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 ARHGAP8P85298 464 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 DEUP1Q05D60 604 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 PDCD2Q16342 344 aaPredicted RBP18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 INTS6LQ5JSJ4 861 aaKnown RBP18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 OVOS1Q6IE37 1185 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 PXYLP1Q8TE99 480 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 SMARCD1Q96GM5 515 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 SLC2A13Q96QE2 648 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 TUBGCP5Q96RT8 1024 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 GORASP1Q9BQQ3 440 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 SLC13A1Q9BZW2 595 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 STN1Q9H668 368 aaKnown RBP18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 RGS18Q9NS28 235 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 PPM1HQ9ULR3 514 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 PRG3Q9Y2Y8 225 aaPredicted RBP18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 TTC3P53804 2025 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 CCDC195A0A1B0GUA6 201 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 SDR42E2A6NKP2 422 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 FAM72CH0Y354 149 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 BUD23O43709 281 aaKnown RBP18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 BAG2O95816 211 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 CUL3Q13618 768 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 FAM72AQ5TYM5 149 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 FAM72DQ6L9T8 149 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 ACAD11Q709F0 780 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 BHLHA9Q7RTU4 235 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 FAM72BQ86X60 149 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 SCAMP5Q8TAC9 235 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 NCSTNQ92542 709 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 CENPKQ9BS16 269 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 THAP1Q9NVV9 213 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 SLC4A7Q9Y6M7 1214 aa18.73■□□□□ 0.59
PDLIM3-201ENST00000284767 M0QZQ0 153 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 ZCCHC18P0CG32 403 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 KITP10721 976 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 GSTT1P30711 240 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 CPOXP36551 454 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 STX3Q13277 289 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 RAB41Q5JT25 222 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 KCNT2Q6UVM3 1135 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 BNIPLQ7Z465 357 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 METTL23Q86XA0 190 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 ACBD6Q9BR61 282 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 KLC2Q9H0B6 622 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 S100A14Q9HCY8 104 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 DTLQ9NZJ0 730 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 MARCOQ9UEW3 520 aaPredicted RBP18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 PTCH2Q9Y6C5 1203 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 A0A088AWK7 358 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 SERPINB9P50453 376 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 FAM171BQ6P995 826 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 SLC24A5Q71RS6 500 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 CAND1Q86VP6 1230 aaKnown RBP18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 OLFM3Q96PB7 478 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 LGMNQ99538 433 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 DDX50Q9BQ39 737 aaKnown RBP18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 SPATA16Q9BXB7 569 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 VCX3BQ9H321 246 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 ZNF395Q9H8N7 513 aaPredicted RBP18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 PLAC1Q9HBJ0 212 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 HCSTQ9UBK5 93 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 STAP1Q9ULZ2 295 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 SNX10Q9Y5X0 201 aa18.72■□□□□ 0.59
PDLIM3-201ENST00000284767 GRK4P32298 578 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 GLB1LQ6UWU2 654 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 EGFL6Q8IUX8 553 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 PKMYT1Q99640 499 aa18.71■□□□□ 0.59
PDLIM3-201ENST00000284767 SMYD2Q9NRG4 433 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms