RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PGRMC2O15173 223 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 HBP1O60381 514 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 CCZ1BP86790 482 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 CCZ1P86791 482 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-201ENST00000282516 SPANXN3Q5MJ09 141 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 OFCC1Q8IZS5 231 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 PHF10Q8WUB8 498 aaKnown RBP8.87□□□□□ -0.99
NIPBL-201ENST00000282516 AIFM2Q9BRQ8 373 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 CNOT7Q9UIV1 285 aaKnown RBP8.87□□□□□ -0.99
NIPBL-201ENST00000282516 A0A0A6YYK5 440 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-201ENST00000282516 H7C1W4 665 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 IFNA6P05013 189 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 MYBL2P10244 700 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 UGT2B15P54855 530 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 PAGE2Q7Z2X7 111 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 PIH1D2Q8WWB5 315 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 ATXN2LQ8WWM7 1075 aaKnown RBP8.87□□□□□ -0.99
NIPBL-201ENST00000282516 ZHX1-C8orf76Q96EF9 292 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 TMBIM4Q9HC24 238 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 INVSQ9Y283 1065 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 MAP2P11137 1827 aaKnown RBP8.87□□□□□ -0.99
NIPBL-201ENST00000282516 OPLAHO14841 1288 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 TRIM3O75382 744 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-201ENST00000282516 IFNGP01579 166 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 KYAT3Q6YP21 454 aaKnown RBP8.87□□□□□ -0.99
NIPBL-201ENST00000282516 STOX1Q6ZVD7 989 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 RNF180Q86T96 592 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 NECTIN3Q9NQS3 549 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 PNPLA3Q9NST1 481 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 AGPAT5Q9NUQ2 364 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 FAM50BQ9Y247 325 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 IGSF1Q8N6C5 1336 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 SGTAO43765 313 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 OR5F1O95221 314 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 CDH3P22223 829 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 CASP5P51878 434 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 FAXCQ5TGI0 409 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 ZNF280DQ6N043 979 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 OAFQ86UD1 273 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 ATL1Q8WXF7 558 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 OR10H1Q9Y4A9 318 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 TAF6LQ9Y6J9 622 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 C21orf2O43822 256 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 ITGB3P05106 788 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 STK4Q13043 487 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 MEIOBQ8N635 442 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 BHLHE22Q8NFJ8 381 aaPredicted RBP8.86□□□□□ -0.99
NIPBL-201ENST00000282516 ZNF354BQ96LW1 612 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 EPB41L1Q9H4G0 881 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 PCDH9Q9HC56 1237 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 FCHO1O14526 889 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 SEMA3DO95025 777 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 FGFR1P11362 822 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 SQLEQ14534 574 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 TNFAIP8L3Q5GJ75 292 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 EFCAB12Q6NXP0 572 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 FAM117BQ6P1L5 589 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 GPRC5AQ8NFJ5 357 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 NEDD1Q8NHV4 660 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 TDRD3Q9H7E2 651 aaKnown RBP8.86□□□□□ -0.99
NIPBL-201ENST00000282516 ALADP13716 330 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 ADSLP30566 484 aaPredicted RBP8.86□□□□□ -0.99
NIPBL-201ENST00000282516 ZNF543Q08ER8 600 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 GPSM1Q86YR5 675 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 ENGASEQ8NFI3 743 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 TBL1YQ9BQ87 522 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 PI4K2AQ9BTU6 479 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 PHF20Q9BVI0 1012 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 ZFYVE28Q9HCC9 887 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 TLR8Q9NR97 1041 aaKnown RBP8.86□□□□□ -0.99
NIPBL-201ENST00000282516 RAPGEFL1Q9UHV5 662 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 A2ML1A8K2U0 1454 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 SCNN1BP51168 640 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 SMU1Q2TAY7 513 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 IL27RAQ6UWB1 636 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 KBTBD2Q8IY47 623 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 PEX5LQ8IYB4 626 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 RASGEF1AQ8N9B8 481 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 KAT2BQ92831 832 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 MRPS7Q9Y2R9 242 aaKnown RBP8.86□□□□□ -0.99
NIPBL-201ENST00000282516 CACNA1FO60840 1977 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 LTFP02788 710 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 PDHBP11177 359 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 GZMAP12544 262 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 TYSND1Q2T9J0 566 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 RRN3Q9NYV6 651 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 PTGFRNQ9P2B2 879 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 OPTCQ9UBM4 332 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 GHRP10912 638 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 THPOP40225 353 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 HUNKP57058 714 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 Q4G0T1 1027 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 MINDY2Q8NBR6 621 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 NOA1Q8NC60 698 aaKnown RBP8.86□□□□□ -0.99
NIPBL-201ENST00000282516 PPP1R16AQ96I34 528 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 ARMCX1Q9P291 453 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 TET3O43151 1660 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 SLC25A27O95847 323 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 GYPCP04921 128 aa8.86□□□□□ -0.99
NIPBL-201ENST00000282516 CYP11B1P15538 503 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms