RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 GRK2P25098 689 aa7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 SPRP35270 261 aaPredicted RBP7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 THPOP40225 353 aa7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 CDK7P50613 346 aa7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 CSE1LP55060 971 aaKnown RBP7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 NRG1Q02297 640 aaPredicted RBP7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 SREBF2Q12772 1141 aa7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 OLIG2Q13516 323 aa7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 TRIM71Q2Q1W2 868 aaKnown RBP7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 CCDC153Q494R4 210 aa7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 CLEC14AQ86T13 490 aa7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 LINC00523Q86TU6 105 aa7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 ZNF598Q86UK7 904 aaKnown RBP7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 LRRTM3Q86VH5 581 aa7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 CCDC117Q8IWD4 279 aaPredicted RBP7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 ZNF778Q96MU6 729 aa7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 SNX15Q9NRS6 342 aa7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 ABCC13Q9NSE7 274 aa7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.4□□□□□ -1.22
SPARCL1-201ENST00000282470 ARHGAP42A6NI28 874 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 POMCP01189 267 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 MPOP05164 745 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 SERPINA6P08185 405 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 GNAZP19086 355 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 BRCC3P46736 316 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 AQP5P55064 265 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 FCGRTP55899 365 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 PDE1BQ01064 536 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 CDH17Q12864 832 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 TUBB3Q13509 450 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 PPP2R5DQ14738 602 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 ACCSLQ4AC99 568 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 ARMC3Q5W041 872 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 OVOS1Q6IE37 1185 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 NAPEPLDQ6IQ20 393 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 C4orf50Q6ZRC1 276 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 TTC7BQ86TV6 843 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 ALYREFQ86V81 257 aaKnown RBP7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 ARHGAP12Q8IWW6 846 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 THEM5Q8N1Q8 247 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 DCLK2Q8N568 766 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 LZTR1Q8N653 840 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 PIWIL2Q8TC59 973 aaKnown RBP7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 ZNF669Q96BR6 464 aaPredicted RBP7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 AGAP3Q96P47 875 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 PPP1R2P1Q96PQ5 205 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 KIFC1Q9BW19 673 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 CCDC106Q9BWC9 280 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 FAM96AQ9H5X1 160 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 DENND2DQ9H6A0 471 aaPredicted RBP7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 ZNF395Q9H8N7 513 aaPredicted RBP7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 COPG2Q9UBF2 871 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 SNX10Q9Y5X0 201 aa7.4□□□□□ -1.23
SPARCL1-201ENST00000282470 TIMM44O43615 452 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 USP12O75317 370 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 LMNAP02545 664 aaKnown RBP7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 ASGR1P07306 291 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 TYK2P29597 1187 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 HADHAP40939 763 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 TM4SF4P48230 202 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 HARS2P49590 506 aaKnown RBP7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 TSPY1Q01534 308 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 PRPSAP1Q14558 356 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 CERCAMQ5T4B2 595 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 AFMIDQ63HM1 303 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 FSTL4Q6MZW2 842 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 CES3Q6UWW8 571 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 RINLQ6ZS11 566 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 STRA8Q7Z7C7 330 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 LCA5Q86VQ0 697 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 CNTD1Q8N815 330 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 DNAAF3Q8N9W5 541 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 SORT1Q99523 831 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 IL12RB2Q99665 862 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 NSMCE4AQ9NXX6 385 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 TAS2R1Q9NYW7 299 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 TMEM216Q9P0N5 145 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 FNIP2Q9P278 1114 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 PCDHB8Q9UN66 801 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 MYLKQ15746 1914 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 TMEM189-UBE2V1I3L0A0 370 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 CA12O43570 354 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 MAFKO60675 156 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 TPBGLP0DKB5 382 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 ESRRAP11474 423 aaPredicted RBP7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 AOC1P19801 751 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 SLC1A6P48664 564 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 SLC5A3P53794 718 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 RPL10AP62906 217 aaKnown RBP7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 KCNA10Q16322 511 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 PPM1JQ5JR12 505 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 C16orf46Q6P387 395 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 ZCCHC23Q6ZST2 131 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 KCNMB4Q86W47 210 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 WDR75Q8IWA0 830 aaKnown RBP7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 SCAMP5Q8TAC9 235 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 ZNF419Q96HQ0 510 aaPredicted RBP7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 FCRL5Q96RD9 977 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 TMEM209Q96SK2 561 aa7.39□□□□□ -1.23
SPARCL1-201ENST00000282470 ADAM2Q99965 735 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms