RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 GBA3Q9H227 469 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 HAUS2Q9NVX0 235 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 ATP11BQ9Y2G3 1177 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 A0A0G2JND7 137 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 C2orf71A6NGG8 1288 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 CDK7P50613 346 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 LBX1P52954 281 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 ALFQ53S48 1182 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 ZCCHC23Q6ZST2 131 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 TRIM62Q9BVG3 475 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 OSBPL2Q9H1P3 480 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 CATSPERBQ9H7T0 1116 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 RBM22Q9NW64 420 aaKnown RBP eCLIP18.33■□□□□ 0.52
CAPN1-201ENST00000279247 MOCS1Q9NZB8 636 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 GGA2Q9UJY4 613 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 NEU3Q9UQ49 428 aa18.33■□□□□ 0.52
CAPN1-201ENST00000279247 FRMPD3Q5JV73 1810 aa18.32■□□□□ 0.52
CAPN1-201ENST00000279247 INPPL1O15357 1258 aa18.32■□□□□ 0.52
CAPN1-201ENST00000279247 PAPOLAP51003 745 aaKnown RBP18.32■□□□□ 0.52
CAPN1-201ENST00000279247 TLE2Q04725 743 aa18.32■□□□□ 0.52
CAPN1-201ENST00000279247 ACTN3Q08043 901 aaPredicted RBP18.32■□□□□ 0.52
CAPN1-201ENST00000279247 PPM1JQ5JR12 505 aa18.32■□□□□ 0.52
CAPN1-201ENST00000279247 BRMS1LQ5PSV4 323 aa18.32■□□□□ 0.52
CAPN1-201ENST00000279247 ITPRIPL1Q6GPH6 555 aa18.32■□□□□ 0.52
CAPN1-201ENST00000279247 CMC1Q7Z7K0 106 aa18.32■□□□□ 0.52
CAPN1-201ENST00000279247 ALKBH8Q96BT7 664 aaKnown RBP18.32■□□□□ 0.52
CAPN1-201ENST00000279247 NACA2Q9H009 215 aa18.32■□□□□ 0.52
CAPN1-201ENST00000279247 FBXO44Q9H4M3 255 aa18.32■□□□□ 0.52
CAPN1-201ENST00000279247 MARCH2Q9P0N8 246 aa18.32■□□□□ 0.52
CAPN1-201ENST00000279247 SCML2Q9UQR0 700 aa18.32■□□□□ 0.52
CAPN1-201ENST00000279247 SYN3O14994 580 aa18.32■□□□□ 0.52
CAPN1-201ENST00000279247 EDF1O60869 148 aaKnown RBP18.32■□□□□ 0.52
CAPN1-201ENST00000279247 OAS1P00973 400 aaKnown RBP18.32■□□□□ 0.52
CAPN1-201ENST00000279247 ETFBP38117 255 aa18.32■□□□□ 0.52
CAPN1-201ENST00000279247 SERPINB4P48594 390 aa18.32■□□□□ 0.52
CAPN1-201ENST00000279247 PRMT2P55345 433 aa18.32■□□□□ 0.52
CAPN1-201ENST00000279247 KIAA1841Q6NSI8 718 aa18.32■□□□□ 0.52
CAPN1-201ENST00000279247 BPTFQ12830 3046 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 TPP1O14773 563 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 TM9SF1O15321 606 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 KITP10721 976 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 MNX1P50219 401 aaPredicted RBP18.31■□□□□ 0.52
CAPN1-201ENST00000279247 PACS1Q6VY07 963 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 NPAS4Q8IUM7 802 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 KIF2BQ8N4N8 673 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 CERS2Q96G23 380 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 HAPLN3Q96S86 360 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 MARCOQ9UEW3 520 aaPredicted RBP18.31■□□□□ 0.52
CAPN1-201ENST00000279247 TRIM33Q9UPN9 1127 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 KCNU1A8MYU2 1149 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 TMEM189-UBE2V1I3L0A0 370 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 MLNP12872 115 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 OR1D2P34982 312 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 ALDH7A1P49419 539 aaKnown RBP18.31■□□□□ 0.52
CAPN1-201ENST00000279247 NEK3P51956 506 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 PACS2Q86VP3 889 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 CFAP52Q8N1V2 620 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 FUBP3Q96I24 572 aaKnown RBP eCLIP18.31■□□□□ 0.52
CAPN1-201ENST00000279247 VPS11Q9H270 941 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 EIF2B3Q9NR50 452 aaKnown RBP18.31■□□□□ 0.52
CAPN1-201ENST00000279247 MYO7AQ13402 2215 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 CHRNA4P43681 627 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 PRPSAP1Q14558 356 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 SH2D5Q6ZV89 423 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 TBC1D1Q86TI0 1168 aaPredicted RBP18.31■□□□□ 0.52
CAPN1-201ENST00000279247 SLC25A41Q8N5S1 370 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 RPRD1AQ96P16 312 aaPredicted RBP18.31■□□□□ 0.52
CAPN1-201ENST00000279247 TTPALQ9BTX7 342 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 FICDQ9BVA6 458 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 CAB39LQ9H9S4 337 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 PRDM16Q9HAZ2 1276 aa18.31■□□□□ 0.52
CAPN1-201ENST00000279247 C20orf96Q9NUD7 363 aaPredicted RBP18.31■□□□□ 0.52
CAPN1-201ENST00000279247 IPO11Q9UI26 975 aaKnown RBP18.31■□□□□ 0.52
CAPN1-201ENST00000279247 J3KR12 359 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 MAFKO60675 156 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 NMBRP28336 390 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 CA8P35219 290 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 MLLT6P55198 1093 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-201ENST00000279247 SLC18A2Q05940 514 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 SEPT6Q14141 434 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 SPNS2Q8IVW8 549 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 PNPLA1Q8N8W4 532 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 RFWD2Q8NHY2 731 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 ERP27Q96DN0 273 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 C8orf48Q96LL4 319 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 TSSK1BQ9BXA7 367 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 ZNF358Q9NW07 568 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 CAPN15O75808 1086 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 HLA-DQB2P05538 268 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 HAPLN1P10915 354 aaPredicted RBP18.3■□□□□ 0.52
CAPN1-201ENST00000279247 DNAJB2P25686 324 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 KCNQ1P51787 676 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 TMPRSS15P98073 1019 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 MS4A13Q5J8X5 152 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 KDM4CQ9H3R0 1056 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 LRRC40Q9H9A6 602 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 TRHDEQ9UKU6 1024 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 OGDHLQ9ULD0 1010 aa18.3■□□□□ 0.52
CAPN1-201ENST00000279247 MTSS1O43312 755 aa18.29■□□□□ 0.52
CAPN1-201ENST00000279247 TLR5O60602 858 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms