RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 PCDHA2Q9Y5H9 948 aa11.48□□□□□ -0.57
USP6NL-201ENST00000277575 KATNA1O75449 491 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 OCM2P0CE71 109 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 OCMP0CE72 109 aaPredicted RBP11.47□□□□□ -0.57
USP6NL-201ENST00000277575 CYP2A7P20853 494 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 PPM1AP35813 382 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 SKIV2L2P42285 1042 aaKnown RBP11.47□□□□□ -0.57
USP6NL-201ENST00000277575 CDK7P50613 346 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 PRKAA2P54646 552 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 ACOX1Q15067 660 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 SPDYCQ5MJ68 293 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 UNC5AQ6ZN44 842 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 MSL3Q8N5Y2 521 aaKnown RBP11.47□□□□□ -0.57
USP6NL-201ENST00000277575 C1orf127Q8N9H9 656 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 SEMA3CQ99985 751 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 CAPN10Q9HC96 672 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 FAM50BQ9Y247 325 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 EP400Q96L91 3159 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 BTN3A1O00481 513 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 C4BPAP04003 597 aaKnown RBP11.47□□□□□ -0.57
USP6NL-201ENST00000277575 FMO4P31512 558 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 PEX5P50542 639 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 PLOD1Q02809 727 aaPredicted RBP11.47□□□□□ -0.57
USP6NL-201ENST00000277575 FBXL19Q6PCT2 694 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 ZCCHC23Q6ZST2 131 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 RD3Q7Z3Z2 195 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 RNF168Q8IYW5 571 aaPredicted RBP11.47□□□□□ -0.57
USP6NL-201ENST00000277575 SPPL2BQ8TCT7 592 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 CASP10Q92851 521 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 VPS50Q96JG6 964 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 CPXM1Q96SM3 734 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 MID1IP1Q9NPA3 183 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 XPNPEP1Q9NQW7 623 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.47□□□□□ -0.575e-6■■■■□ 20.5
USP6NL-201ENST00000277575 A0A0G2JLL6 359 aaPredicted RBP11.47□□□□□ -0.57
USP6NL-201ENST00000277575 ALBP02768 609 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 CYP2A6P11509 494 aaPredicted RBP11.47□□□□□ -0.57
USP6NL-201ENST00000277575 PCNAP12004 261 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 SLC2A4P14672 509 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 HLA-DPA1P20036 260 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 ZCWPW2Q504Y3 356 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 FNDC3BQ53EP0 1204 aaKnown RBP11.47□□□□□ -0.57
USP6NL-201ENST00000277575 WLSQ5T9L3 541 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 PRRT2Q7Z6L0 340 aaPredicted RBP11.47□□□□□ -0.57
USP6NL-201ENST00000277575 ATXN2LQ8WWM7 1075 aaKnown RBP11.47□□□□□ -0.57
USP6NL-201ENST00000277575 ZNF75CPQ92670 426 aaPredicted RBP11.47□□□□□ -0.57
USP6NL-201ENST00000277575 FCRL2Q96LA5 508 aaPredicted RBP11.47□□□□□ -0.57
USP6NL-201ENST00000277575 TMEM114B3SHH9 223 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 VHLP40337 213 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 KCNA10Q16322 511 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 C16orf46Q6P387 395 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 LRRC8BQ6P9F7 803 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 C16orf87Q6PH81 154 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 KYAT3Q6YP21 454 aaKnown RBP11.47□□□□□ -0.57
USP6NL-201ENST00000277575 CERS2Q96G23 380 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 TTPALQ9BTX7 342 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 MLPHQ9BV36 600 aaPredicted RBP11.47□□□□□ -0.57
USP6NL-201ENST00000277575 PDZD7Q9H5P4 517 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 RXFP1Q9HBX9 757 aa11.47□□□□□ -0.57
USP6NL-201ENST00000277575 FCHO1O14526 889 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 CILPO75339 1184 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 DAB1O75553 588 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 STAU1O95793 577 aaKnown RBP11.46□□□□□ -0.57
USP6NL-201ENST00000277575 KCNA3P22001 575 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 RFX3P48380 749 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 ANXA11P50995 505 aaKnown RBP11.46□□□□□ -0.57
USP6NL-201ENST00000277575 NCALDP61601 193 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 HGSNATQ68CP4 663 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 DUPD1Q68J44 220 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 USP45Q70EL2 814 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 BBS7Q8IWZ6 715 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 STK40Q8N2I9 435 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 GPR152Q8TDT2 470 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 HPS4Q9NQG7 708 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 CDV3Q9UKY7 258 aaKnown RBP11.46□□□□□ -0.57
USP6NL-201ENST00000277575 ATRNL1Q5VV63 1379 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 KANSL1LA0AUZ9 987 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 MAP3K13O43283 966 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 CPSF4O95639 269 aaKnown RBP11.46□□□□□ -0.57
USP6NL-201ENST00000277575 SMPD1P17405 629 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 SNRPD1P62314 119 aaKnown RBP11.46□□□□□ -0.57
USP6NL-201ENST00000277575 DUSP4Q13115 394 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 PGS1Q32NB8 556 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 PREPLQ4J6C6 727 aaPredicted RBP11.46□□□□□ -0.57
USP6NL-201ENST00000277575 CES5AQ6NT32 575 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 MED8Q96G25 268 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 SH3GL1Q99961 368 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 NFKBIZQ9BYH8 718 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 C6orf203Q9P0P8 240 aaPredicted RBP11.46□□□□□ -0.57
USP6NL-201ENST00000277575 RBPJLQ9UBG7 517 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 DDX20Q9UHI6 824 aaKnown RBP11.46□□□□□ -0.57
USP6NL-201ENST00000277575 ANKRD6Q9Y2G4 727 aa11.46□□□□□ -0.57
USP6NL-201ENST00000277575 NID2Q14112 1375 aa11.46□□□□□ -0.58
USP6NL-201ENST00000277575 TSPAN1O60635 241 aa11.46□□□□□ -0.58
USP6NL-201ENST00000277575 NOL4O94818 638 aa11.46□□□□□ -0.58
USP6NL-201ENST00000277575 MLNP12872 115 aa11.46□□□□□ -0.58
USP6NL-201ENST00000277575 PTPN4P29074 926 aa11.46□□□□□ -0.58
USP6NL-201ENST00000277575 ADRA1BP35368 520 aa11.46□□□□□ -0.58
USP6NL-201ENST00000277575 FLT3P36888 993 aa11.46□□□□□ -0.58
USP6NL-201ENST00000277575 HIRAP54198 1017 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms