RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 ZNF540Q8NDQ6 660 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 RDH11Q8TC12 318 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 CCDC167Q9P0B6 97 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 PTGFRNQ9P2B2 879 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 SIK3Q9Y2K2 1263 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 IRAK3Q9Y616 596 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 CYP27B1O15528 508 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 SNRPB2P08579 225 aaKnown RBP8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 CTSHP09668 335 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 SKP1P63208 163 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 ACSM2AQ08AH3 577 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 TCEAL5Q5H9L2 206 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 ACSM2BQ68CK6 577 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 ACOT1Q86TX2 421 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 OFCC1Q8IZS5 231 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 UBE2E3Q969T4 207 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 BBS4Q96RK4 519 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 TRIT1Q9H3H1 467 aaKnown RBP8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 RBM22Q9NW64 420 aaKnown RBP eCLIP8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 FKBP14Q9NWM8 211 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 ABI2Q9NYB9 513 aaPredicted RBP8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 ANGPT4Q9Y264 503 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 PBRM1Q86U86 1689 aa8.85□□□□□ -0.99
SCUBE3-201ENST00000274938 TPD52L2O43399 206 aaKnown RBP8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 DBTP11182 482 aaKnown RBP8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 COX7A2P14406 83 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 NTSP30990 170 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 TRIM32Q13049 653 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 RETSATQ6NUM9 610 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 ACMSDQ8TDX5 336 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 APOL2Q9BQE5 337 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 CCDC3Q9BQI4 270 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 SH2D3AQ9BRG2 576 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 FUCA2Q9BTY2 467 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 GPN1Q9HCN4 374 aaPredicted RBP8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 SSR3Q9UNL2 185 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 ZFYVE16Q7Z3T8 1539 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 HOXA2O43364 376 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 ALDH9A1P49189 494 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 HLA-DQA1Q5Y7H0 255 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 ZNF549Q6P9A3 640 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 ARMC8Q8IUR7 673 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 MRPS31Q92665 395 aaKnown RBP8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 KAT2BQ92831 832 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 SLC5A5Q92911 643 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 PARK7Q99497 189 aaKnown RBP8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 MTMR12Q9C0I1 747 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 AAASQ9NRG9 546 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 VPS28Q9UK41 221 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 ITGA11Q9UKX5 1188 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 CHADO15335 359 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 MT-CO1P00395 513 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 STAG3L1P0CL83 205 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 MBL2P11226 248 aaPredicted RBP8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 MGAT1P26572 445 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 CDK9P50750 372 aaKnown RBP8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 GCNT1Q02742 428 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 DDR1Q08345 913 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 CBWD3Q5JTY5 395 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 CBWD5Q5RIA9 395 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 NUDT12Q9BQG2 462 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 OPTCQ9UBM4 332 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 ASTN2O75129 1339 aaPredicted RBP8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 SAGE2PA6NJ88 616 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 APOC4-APOC2K7ER74 178 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 KPNA5O15131 536 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 APOC2P02655 101 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 GSSP48637 474 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 CPT1AP50416 773 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 PKNOX1P55347 436 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 SMCO1Q147U7 214 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 STARD3Q14849 445 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 NRF1Q16656 503 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 ZNF470Q6ECI4 717 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 TTC7BQ86TV6 843 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 FAM131BQ86XD5 332 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 KATNAL2Q8IYT4 538 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 RNF148Q8N7C7 305 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 TRPV1Q8NER1 839 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 LPCAT1Q8NF37 534 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 ETNPPLQ8TBG4 499 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 MTMR8Q96EF0 704 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 VMP1Q96GC9 406 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 KLHL32Q96NJ5 620 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 XPNPEP3Q9NQH7 507 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 CRYL1Q9Y2S2 319 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 RGSL1A5PLK6 1076 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 SNAP23O00161 211 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 RARAP10276 462 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 TNFAIP8L3Q5GJ75 292 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 ZNF621Q6ZSS3 439 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 NT5DC4Q86YG4 428 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 CARNMT1Q8N4J0 409 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 CRAMP1Q96RY5 1269 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 HGH1Q9BTY7 390 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 CISHQ9NSE2 258 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 ZNF221Q9UK13 617 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 COQ6Q9Y2Z9 468 aa8.84□□□□□ -0.99
SCUBE3-201ENST00000274938 CYP7B1O75881 506 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms