RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 KCTD15Q96SI1 283 aaPredicted RBP13.18□□□□□ -0.3
COL8A1-202ENST00000273342 SLC29A1Q99808 456 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 SIKE1Q9BRV8 207 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 CDT1Q9H211 546 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 STN1Q9H668 368 aaKnown RBP13.18□□□□□ -0.3
COL8A1-202ENST00000273342 GGA3Q9NZ52 723 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 KCNU1A8MYU2 1149 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 G3V2L1 256 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 TPST1O60507 370 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 TRIM13O60858 407 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 PFKMP08237 780 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 ADORA2BP29275 332 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 GRIA4P48058 902 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 NDST2P52849 883 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 LPIN1Q14693 890 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 STXBP2Q15833 593 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 PIGGQ5H8A4 983 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 SEL1L3Q68CR1 1132 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 AHI1Q8N157 1196 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 NUP93Q8N1F7 819 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 CDHR1Q96JP9 859 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 APBA2Q99767 749 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 EPB41L1Q9H4G0 881 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 NMRAL1Q9HBL8 299 aa13.18□□□□□ -0.3
COL8A1-202ENST00000273342 RSL24D1Q9UHA3 163 aaKnown RBP13.18□□□□□ -0.3
COL8A1-202ENST00000273342 ZNF214Q9UL59 606 aaPredicted RBP13.18□□□□□ -0.3
COL8A1-202ENST00000273342 MFSD11O43934 449 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 STAG3L1P0CL83 205 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 DPEP1P16444 411 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 TFEBP19484 476 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 CNTFP26441 200 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 GP5P40197 560 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 GHRHRQ02643 423 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 PTK2BQ14289 1009 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 MGAT5BQ3V5L5 792 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 ILDR2Q71H61 639 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 TTC30AQ86WT1 665 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 APBB2Q92870 758 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 P2RY11Q96G91 374 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 SLC39A3Q9BRY0 314 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 BCO2Q9BYV7 579 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 CXCL16Q9H2A7 254 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 NOL11Q9H8H0 719 aaKnown RBP13.17□□□□□ -0.3
COL8A1-202ENST00000273342 MAP3K20Q9NYL2 800 aaKnown RBP13.17□□□□□ -0.3
COL8A1-202ENST00000273342 CROCCQ5TZA2 2017 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 VAPBO95292 243 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 POLBP06746 335 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 VDRP11473 427 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 MYL4P12829 197 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 PGAM1P18669 254 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 TPSB2P20231 275 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 GLDCP23378 1020 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 ABCD1P33897 745 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 SEMA5AQ13591 1074 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 TPSAB1Q15661 275 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 CERCAMQ5T4B2 595 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 CLVS1Q8IUQ0 354 aaPredicted RBP13.17□□□□□ -0.3
COL8A1-202ENST00000273342 FAM149B1Q96BN6 582 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 HESX1Q9UBX0 185 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 EBF1Q9UH73 591 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 GINS2Q9Y248 185 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 ZNF510Q9Y2H8 683 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 TRIP11Q15643 1979 aa13.17□□□□□ -0.3
COL8A1-202ENST00000273342 GABBR2O75899 941 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 CLIC3O95833 236 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 IMPDH2P12268 514 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 GARSP41250 739 aaKnown RBP13.16□□□□□ -0.3
COL8A1-202ENST00000273342 EFNA5P52803 228 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 PITX1P78337 314 aaPredicted RBP13.16□□□□□ -0.3
COL8A1-202ENST00000273342 NCBP2-AS2Q69YL0 99 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 OLFML1Q6UWY5 402 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 ANKRD23Q86SG2 305 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 PNPLA1Q8N8W4 532 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 ACMSDQ8TDX5 336 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 KHSRPQ92945 711 aaKnown RBP eCLIP13.16□□□□□ -0.3
COL8A1-202ENST00000273342 ZNF696Q9H7X3 374 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 IARS2Q9NSE4 1012 aaKnown RBP13.16□□□□□ -0.3
COL8A1-202ENST00000273342 RRN3Q9NYV6 651 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 SFMBT1Q9UHJ3 866 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 A0A0A0MRY4 1105 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 HSDL1Q3SXM5 330 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 ADCY4Q8NFM4 1077 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 URGCPQ8TCY9 931 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 SPATA13Q96N96 652 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 GBA2Q9HCG7 927 aaPredicted RBP13.16□□□□□ -0.3
COL8A1-202ENST00000273342 UBR3Q6ZT12 1888 aa13.16□□□□□ -0.3
COL8A1-202ENST00000273342 FAM149AA5PLN7 773 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 SAC3D1A6NKF1 404 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 HDAC3O15379 428 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 MAFO75444 373 aaPredicted RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 ALDH1A2O94788 518 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 HNRNPLP14866 589 aaKnown RBP eCLIP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 UGT1A6P19224 532 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 MAGEA6P43360 314 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 RPL14P50914 215 aaKnown RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 NAA20P61599 178 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 IFRD2Q12894 506 aaPredicted RBP13.15□□□□□ -0.3
COL8A1-202ENST00000273342 SOWAHAQ2M3V2 549 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 RNF169Q8NCN4 708 aa13.15□□□□□ -0.3
COL8A1-202ENST00000273342 PPP1R13LQ8WUF5 828 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms