RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 AZIN2Q96A70 460 aa15.74■□□□□ 0.11
COPS3-201ENST00000268717 TRPM5Q9NZQ8 1165 aa15.74■□□□□ 0.11
COPS3-201ENST00000268717 MAGED2Q9UNF1 606 aaPredicted RBP15.74■□□□□ 0.11
COPS3-201ENST00000268717 ASB3Q9Y575 518 aa15.74■□□□□ 0.11
COPS3-201ENST00000268717 SLC12A8A0AV02 714 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 DRGXA6NNA5 263 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 ERI2A8K979 691 aaKnown RBP15.73■□□□□ 0.11
COPS3-201ENST00000268717 CDH16O75309 829 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 CXCL14O95715 111 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 MOCS2O96007 188 aaPredicted RBP15.73■□□□□ 0.11
COPS3-201ENST00000268717 APRTP07741 180 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 GSTA2P09210 222 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 PTPN3P26045 913 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 NDST2P52849 883 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 AUHQ13825 339 aaKnown RBP15.73■□□□□ 0.11
COPS3-201ENST00000268717 KCNC3Q14003 757 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 FASTKD3Q14CZ7 662 aaKnown RBP15.73■□□□□ 0.11
COPS3-201ENST00000268717 PUS10Q3MIT2 529 aaKnown RBP15.73■□□□□ 0.11
COPS3-201ENST00000268717 MSS51Q4VC12 460 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 KCTD16Q68DU8 428 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 ITPRIPL1Q6GPH6 555 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 PTCRAQ6ISU1 281 aaPredicted RBP15.73■□□□□ 0.11
COPS3-201ENST00000268717 ITIH5Q86UX2 942 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 ZNF567Q8N184 647 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 UMODL1-AS1Q8N2C9 162 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 SH2D3CQ8N5H7 860 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 VN1R2Q8NFZ6 395 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 AUTS2Q8WXX7 1259 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 PSMG2Q969U7 264 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 PLD4Q96BZ4 506 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 MSLNLQ96KJ4 702 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 ZNF512Q96ME7 567 aaPredicted RBP15.73■□□□□ 0.11
COPS3-201ENST00000268717 UHRF1Q96T88 793 aaPredicted RBP15.73■□□□□ 0.11
COPS3-201ENST00000268717 PRMT1Q99873 361 aaKnown RBP15.73■□□□□ 0.11
COPS3-201ENST00000268717 ZYG11BQ9C0D3 744 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 CENPHQ9H3R5 247 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 CCSER2Q9H7U1 834 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 TMEM248Q9NWD8 314 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 CLEC1BQ9P126 229 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 TEX264Q9Y6I9 313 aa15.73■□□□□ 0.11
COPS3-201ENST00000268717 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.72■□□□□ 0.11
COPS3-201ENST00000268717 GRXCR2A6NFK2 248 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 TEX28O15482 410 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 TBX18O95935 607 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 CA8P35219 290 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 EPHB3P54753 998 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 IFI35P80217 286 aaPredicted RBP15.72■□□□□ 0.11
COPS3-201ENST00000268717 GAD2Q05329 585 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 BBS9Q3SYG4 887 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 C5orf22Q49AR2 442 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 TEX44Q53QW1 395 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 TIGD7Q6NT04 549 aaPredicted RBP15.72■□□□□ 0.11
COPS3-201ENST00000268717 TMEM184AQ6ZMB5 413 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 CAND1Q86VP6 1230 aaKnown RBP15.72■□□□□ 0.11
COPS3-201ENST00000268717 MIB1Q86YT6 1006 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 KLHDC8BQ8IXV7 354 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 ATPAF2Q8N5M1 289 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 CCDC33Q8N5R6 958 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 FBXO36Q8NEA4 188 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 EPS8L3Q8TE67 593 aaKnown RBP15.72■□□□□ 0.11
COPS3-201ENST00000268717 PPP1R2P1Q96PQ5 205 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 WDR83Q9BRX9 315 aaKnown RBP15.72■□□□□ 0.11
COPS3-201ENST00000268717 SLC24A2Q9UI40 661 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 NOVA2Q9UNW9 492 aaKnown RBP15.72■□□□□ 0.11
COPS3-201ENST00000268717 INSL5Q9Y5Q6 135 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 PRRG1O14668 218 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 SHOX2O60902 331 aaPredicted RBP15.72■□□□□ 0.11
COPS3-201ENST00000268717 C1RP00736 705 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 IL9P15248 144 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 GYS2P54840 703 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 GPX6P59796 221 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 TAF12Q16514 161 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 ZNF534Q76KX8 674 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 C14orf80Q86SX3 495 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 TP53INP2Q8IXH6 220 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 UHMK1Q8TAS1 419 aaKnown RBP15.72■□□□□ 0.11
COPS3-201ENST00000268717 ZSCAN18Q8TBC5 510 aaPredicted RBP15.72■□□□□ 0.11
COPS3-201ENST00000268717 LRRN4Q8WUT4 740 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 TEKT5Q96M29 485 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 NECAB3Q96P71 396 aaPredicted RBP15.72■□□□□ 0.11
COPS3-201ENST00000268717 GBA3Q9H227 469 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 CNOT10Q9H9A5 744 aaKnown RBP15.72■□□□□ 0.11
COPS3-201ENST00000268717 VPS37BQ9H9H4 285 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 EURLQ9NYK6 297 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 KLHL8Q9P2G9 620 aaPredicted RBP15.72■□□□□ 0.11
COPS3-201ENST00000268717 CD207Q9UJ71 328 aa15.72■□□□□ 0.11
COPS3-201ENST00000268717 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.72■□□□□ 0.11
COPS3-201ENST00000268717 EXOC1LA0A1B0GW35 172 aa15.71■□□□□ 0.11
COPS3-201ENST00000268717 TLDC2A0PJX2 215 aa15.71■□□□□ 0.11
COPS3-201ENST00000268717 CACNG3O60359 315 aa15.71■□□□□ 0.11
COPS3-201ENST00000268717 CLASP2O75122 1294 aaKnown RBP15.71■□□□□ 0.11
COPS3-201ENST00000268717 SUN1O94901 812 aa15.71■□□□□ 0.11
COPS3-201ENST00000268717 MMP13P45452 471 aa15.71■□□□□ 0.11
COPS3-201ENST00000268717 MAPKAPK2P49137 400 aa15.71■□□□□ 0.11
COPS3-201ENST00000268717 TWF1Q12792 350 aa15.71■□□□□ 0.11
COPS3-201ENST00000268717 NR1H3Q13133 447 aa15.71■□□□□ 0.11
COPS3-201ENST00000268717 KLHL38Q2WGJ6 581 aa15.71■□□□□ 0.11
COPS3-201ENST00000268717 FAM182AQ5T1J6 154 aa15.71■□□□□ 0.11
COPS3-201ENST00000268717 FAXCQ5TGI0 409 aa15.71■□□□□ 0.11
COPS3-201ENST00000268717 LRRC8BQ6P9F7 803 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms