RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 HIST1H2ABP04908 130 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 NAA20P61599 178 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 HIST3H2AQ7L7L0 130 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 ZC3H7AQ8IWR0 971 aaKnown RBP11.34□□□□□ -0.59
CHFR-201ENST00000266880 PCDH20Q8N6Y1 951 aaKnown RBP11.34□□□□□ -0.59
CHFR-201ENST00000266880 ZNF540Q8NDQ6 660 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 HIST1H2ACQ93077 130 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 MTFMTQ96DP5 389 aaKnown RBP11.34□□□□□ -0.59
CHFR-201ENST00000266880 IFRD1O00458 451 aaPredicted RBP11.34□□□□□ -0.59
CHFR-201ENST00000266880 TBX3O15119 743 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 GLP2RO95838 553 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 DEFA5Q01523 94 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 DHDDSQ86SQ9 333 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 PALB2Q86YC2 1186 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 SLC6A15Q9H2J7 730 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 PCDHB2Q9Y5E7 798 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 CROCC2H7BZ55 1655 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 LMTK3Q96Q04 1460 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 ITGALP20701 1170 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 CDKL1Q00532 357 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 MGAT5Q09328 741 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 A2MP01023 1474 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 MYH13Q9UKX3 1938 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.34□□□□□ -0.59
CHFR-201ENST00000266880 CYP27B1O15528 508 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 SEC22BO75396 215 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 ZNF24P17028 368 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 ZNF177Q13360 481 aaPredicted RBP11.34□□□□□ -0.59
CHFR-201ENST00000266880 KCNA10Q16322 511 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 SHOC2Q9UQ13 582 aa11.34□□□□□ -0.59
CHFR-201ENST00000266880 EIF3DO15371 548 aaKnown RBP eCLIP11.33□□□□□ -0.59
CHFR-201ENST00000266880 FAM153BP0C7A2 387 aa11.33□□□□□ -0.59
CHFR-201ENST00000266880 FAM153CQ494X1 144 aa11.33□□□□□ -0.59
CHFR-201ENST00000266880 PTPN20Q4JDL3 420 aa11.33□□□□□ -0.59
CHFR-201ENST00000266880 CARNMT1Q8N4J0 409 aa11.33□□□□□ -0.59
CHFR-201ENST00000266880 CLHC1Q8NHS4 586 aa11.33□□□□□ -0.59
CHFR-201ENST00000266880 CTSHP09668 335 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 RIPK1Q13546 671 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 POU6F1Q14863 301 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 SPERTQ8NA61 448 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 RFT1Q96AA3 541 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 GPN1Q9HCN4 374 aaPredicted RBP11.33□□□□□ -0.6
CHFR-201ENST00000266880 DDIT4Q9NX09 232 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 FLT1P17948 1338 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 RGS10O43665 173 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 APOC1P02654 83 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 PRH1P02810 166 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 AZGP1P25311 298 aaKnown RBP11.33□□□□□ -0.6
CHFR-201ENST00000266880 PABPC1LQ4VXU2 614 aaKnown RBP11.33□□□□□ -0.6
CHFR-201ENST00000266880 OR6J1Q8NGC5 347 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 AIFM2Q9BRQ8 373 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 DMTF1Q9Y222 760 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 INVSQ9Y283 1065 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 DRG1Q9Y295 367 aaKnown RBP11.33□□□□□ -0.6
CHFR-201ENST00000266880 ARL3P36405 182 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 NIF3L1Q9GZT8 377 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 CYTH4Q9UIA0 394 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 SSR3Q9UNL2 185 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 PTPRKQ15262 1439 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 A0A0B4J269 797 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 SNX4O95219 450 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 ANPEPP15144 967 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 TUBB3Q13509 450 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 C4orf46Q504U0 113 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 OGFRL1Q5TC84 451 aaPredicted RBP11.33□□□□□ -0.6
CHFR-201ENST00000266880 SYN2Q92777 582 aaPredicted RBP11.33□□□□□ -0.6
CHFR-201ENST00000266880 ZNF350Q9GZX5 532 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 EXD2Q9NVH0 621 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 ENTPD5O75356 428 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 MTAPQ13126 283 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 HKDC1Q2TB90 917 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 MGAT5BQ3V5L5 792 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 BICRALQ6AI39 1079 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 Q96MT0 163 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 ABCG2Q9UNQ0 655 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 FAM50BQ9Y247 325 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 SPAG17Q6Q759 2223 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 SERPINA1P01009 418 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 PHKG2P15735 406 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 S100A3P33764 101 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 RAP1GAPP47736 663 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 SLC5A9Q2M3M2 681 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 AFTPHQ6ULP2 937 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 FUKQ8N0W3 1084 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 SLC38A2Q96QD8 506 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 SEMA4AQ9H3S1 761 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 HPF1Q9NWY4 346 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 APOL3O95236 402 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 COX7A2P14406 83 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 PHC1P78364 1004 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 SLC25A3Q00325 362 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 FAM171BQ6P995 826 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 OR2L5Q8NG80 312 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 PLA2G4CQ9UP65 541 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 RIPK2O43353 540 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 CD53P19397 219 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 HERVK_113P62684 666 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 PTAR1Q7Z6K3 402 aaPredicted RBP11.33□□□□□ -0.6
CHFR-201ENST00000266880 FBXO39Q8N4B4 442 aa11.33□□□□□ -0.6
CHFR-201ENST00000266880 MRPL9Q9BYD2 267 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms