RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 WDCPQ9H6R7 721 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 LRRC40Q9H9A6 602 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 TAS2R1Q9NYW7 299 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 RAD54BQ9Y620 910 aa13.19□□□□□ -0.3
CPSF6-201ENST00000266679 ATP9BO43861 1147 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 CHRNA1P02708 482 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 PROCP04070 461 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 AKR1A1P14550 325 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 BDNFP23560 247 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 TYK2P29597 1187 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 SLC1A6P48664 564 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 GALNT2Q10471 571 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 GNASQ5JWF2 1037 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 CERCAMQ5T4B2 595 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 STXBP5Q5T5C0 1151 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 TEDDM1Q5T9Z0 273 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 C10orf107Q8IVU9 208 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 DCLK2Q8N568 766 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 TEX9Q8N6V9 391 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 RNF34Q969K3 372 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 HDAC11Q96DB2 347 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 PGAP3Q96FM1 320 aaPredicted RBP13.18□□□□□ -0.3
CPSF6-201ENST00000266679 CPNE1Q99829 537 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 RTP3Q9BQQ7 232 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 MTG1Q9BT17 334 aaPredicted RBP13.18□□□□□ -0.3
CPSF6-201ENST00000266679 SENP6Q9GZR1 1112 aaPredicted RBP13.18□□□□□ -0.3
CPSF6-201ENST00000266679 YY1AP1Q9H869 796 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 CASS4Q9NQ75 786 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 SNX15Q9NRS6 342 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 UBP1Q9NZI7 540 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 BFARQ9NZS9 450 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 DCDC2Q9UHG0 476 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 COL6A3P12111 3177 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 SCN10AQ9Y5Y9 1956 aa13.18□□□□□ -0.3
CPSF6-201ENST00000266679 CAPN14A8MX76 684 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 LRIG2O94898 1065 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 PRKCGP05129 697 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 ODC1P11926 461 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 PCSK1P29120 753 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 BRCC3P46736 316 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 HCAR3P49019 387 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 CDK18Q07002 472 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 UBAP2LQ14157 1087 aaKnown RBP13.17□□□□□ -0.3
CPSF6-201ENST00000266679 KPNB1Q14974 876 aaKnown RBP13.17□□□□□ -0.3
CPSF6-201ENST00000266679 DBN1Q16643 649 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 GRTP1Q5TC63 336 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 LHX8Q68G74 356 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 NECAB2Q7Z6G3 386 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 STRA8Q7Z7C7 330 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 RSPH3Q86UC2 560 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 ENDOVQ8N8Q3 282 aaKnown RBP13.17□□□□□ -0.3
CPSF6-201ENST00000266679 FBXO27Q8NI29 283 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 USP33Q8TEY7 942 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 AGAP2Q99490 1192 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 RBBP8Q99708 897 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 LBHD1Q9BQE6 289 aaPredicted RBP13.17□□□□□ -0.3
CPSF6-201ENST00000266679 ZNF358Q9NW07 568 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 TMEM216Q9P0N5 145 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 OR12D3Q9UGF7 316 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 OGDHLQ9ULD0 1010 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 RPL26L1Q9UNX3 145 aaKnown RBP13.17□□□□□ -0.3
CPSF6-201ENST00000266679 CCDC78A2IDD5 438 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 B2RBV5 119 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 NCAM2O15394 837 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 PGK1P00558 417 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 POMCP01189 267 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 TPH1P17752 444 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 MX2P20592 715 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 CXCR3P49682 368 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 SERPINB8P50452 374 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 KDSRQ06136 332 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 TAF11Q15544 211 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 ANKRD20A4Q4UJ75 823 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 KHDC1Q4VXA5 237 aaKnown RBP13.17□□□□□ -0.3
CPSF6-201ENST00000266679 ITPRIPL1Q6GPH6 555 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 C7orf61Q8IZ16 206 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 TMEM209Q96SK2 561 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 MYCBPQ99417 103 aaPredicted RBP13.17□□□□□ -0.3
CPSF6-201ENST00000266679 AGO3Q9H9G7 860 aaKnown RBP13.17□□□□□ -0.3
CPSF6-201ENST00000266679 TMLHEQ9NVH6 421 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 RRN3Q9NYV6 651 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 GIT1Q9Y2X7 761 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 PATJQ8NI35 1801 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 MYO16Q9Y6X6 1858 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 MYLKQ15746 1914 aa13.17□□□□□ -0.3
CPSF6-201ENST00000266679 NLRC5Q86WI3 1866 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 ARHGAP42A6NI28 874 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 KRT36O76013 467 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 F9P00740 461 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 JCHAINP01591 159 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 SERPINE1P05121 402 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 SERPINB6P35237 376 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 PGM1P36871 562 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 SESN3P58005 492 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 UPP1Q16831 310 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 MFSD14CQ5VZR4 134 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 KCTD11Q693B1 232 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 RWDD4Q6NW29 188 aaKnown RBP13.16□□□□□ -0.3
CPSF6-201ENST00000266679 KIRREL3Q8IZU9 778 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 DQX1Q8TE96 717 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms