RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 ZNF536O15090 1300 aa15.69■□□□□ 0.1
TIMP3-201ENST00000266085 CCNB1P14635 433 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 PSMA4P25789 261 aaKnown RBP15.68■□□□□ 0.1
TIMP3-201ENST00000266085 HALP42357 657 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 NME5P56597 212 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 SPIRE1Q08AE8 756 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 SLC10A6Q3KNW5 377 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 ERAP2Q6P179 960 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 SPPL2BQ8TCT7 592 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 ABTB1Q969K4 478 aaPredicted RBP15.68■□□□□ 0.1
TIMP3-201ENST00000266085 MRPS23Q9Y3D9 190 aaKnown RBP15.68■□□□□ 0.1
TIMP3-201ENST00000266085 HNRNPRO43390 633 aaKnown RBP15.68■□□□□ 0.1
TIMP3-201ENST00000266085 BUD23O43709 281 aaKnown RBP15.68■□□□□ 0.1
TIMP3-201ENST00000266085 KRT6AP02538 564 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 KRT6BP04259 564 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 ERVK-10P10266 1014 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 EPB42P16452 691 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 KRT6CP48668 564 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 HPCAP84074 193 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 FUT11Q495W5 492 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 AGKQ53H12 422 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 PCID2Q5JVF3 399 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 C7orf43Q8WVR3 580 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 OTULINQ96BN8 352 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 TM6SF2Q9BZW4 377 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 DHX15O43143 795 aaKnown RBP15.68■□□□□ 0.1
TIMP3-201ENST00000266085 TBC1D4O60343 1298 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 PTPN4P29074 926 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 CHKAP35790 457 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 PLEKHA7Q6IQ23 1121 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 ZNF557Q8N988 423 aaPredicted RBP15.68■□□□□ 0.1
TIMP3-201ENST00000266085 SLAIN1Q8ND83 568 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 ZNF75CPQ92670 426 aaPredicted RBP15.68■□□□□ 0.1
TIMP3-201ENST00000266085 TMEM159Q96B96 161 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 FCRL2Q96LA5 508 aaPredicted RBP15.68■□□□□ 0.1
TIMP3-201ENST00000266085 BATF3Q9NR55 127 aa15.68■□□□□ 0.1
TIMP3-201ENST00000266085 DAB1O75553 588 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 ATP5BP06576 529 aaKnown RBP15.67■□□□□ 0.1
TIMP3-201ENST00000266085 PEX5P50542 639 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 POLR2LP62875 67 aaKnown RBP15.67■□□□□ 0.1
TIMP3-201ENST00000266085 NFYCQ13952 458 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 ATP6AP1LQ52LC2 224 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 LRRC8DQ7L1W4 858 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 FZD8Q9H461 694 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 CDHR5Q9HBB8 845 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 MYBL2P10244 700 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 KCNA3P22001 575 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 SP2Q02086 613 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 TARBP2Q15633 366 aaKnown RBP15.67■□□□□ 0.1
TIMP3-201ENST00000266085 KCTD19Q17RG1 926 aaPredicted RBP15.67■□□□□ 0.1
TIMP3-201ENST00000266085 RNF168Q8IYW5 571 aaPredicted RBP15.67■□□□□ 0.1
TIMP3-201ENST00000266085 RMND5AQ9H871 391 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 SELENONQ9NZV5 590 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 TRAV19A0A0A6YYK7 116 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 ARIH2O95376 493 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 CD86P42081 329 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 TMED1Q13445 227 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 SLC25A52Q3SY17 297 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 ZC3H12BQ5HYM0 836 aaKnown RBP15.67■□□□□ 0.1
TIMP3-201ENST00000266085 HORMAD1Q86X24 394 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 ACOX2Q99424 681 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 ZCCHC2Q9C0B9 1178 aaKnown RBP15.67■□□□□ 0.1
TIMP3-201ENST00000266085 DCLRE1BQ9H816 532 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 ANKRD6Q9Y2G4 727 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 CRYL1Q9Y2S2 319 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 DYRK1BQ9Y463 629 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 RAD51BO15315 384 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 MSH3P20585 1137 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 SERPINA4P29622 427 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 CLCNKBP51801 687 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 CCNG1P51959 295 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 LILRA4P59901 499 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 AUHQ13825 339 aaKnown RBP15.67■□□□□ 0.1
TIMP3-201ENST00000266085 IFNL1Q8IU54 200 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 PHACTR4Q8IZ21 702 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 PCDH18Q9HCL0 1135 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 POLG2Q9UHN1 485 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 APPL1Q9UKG1 709 aa15.67■□□□□ 0.1
TIMP3-201ENST00000266085 TBC1D3BA6NDS4 549 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 MGAT4DA6NG13 374 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 NR5A2O00482 541 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 FCHO1O14526 889 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 PHGDHO43175 533 aaKnown RBP15.66■□□□□ 0.1
TIMP3-201ENST00000266085 ALDH1A2O94788 518 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 HNRNPH1P31943 449 aaKnown RBP15.66■□□□□ 0.1
TIMP3-201ENST00000266085 ADRA1BP35368 520 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 ARHGAP1Q07960 439 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 BOP1Q14137 746 aaKnown RBP15.66■□□□□ 0.1
TIMP3-201ENST00000266085 ART4Q93070 314 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 CERS2Q96G23 380 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 SEMA3CQ99985 751 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 KANSL1LA0AUZ9 987 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 F8W810 466 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 GUCA1CO95843 209 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 POLR2EP19388 210 aaKnown RBP15.66■□□□□ 0.1
TIMP3-201ENST00000266085 TAF10Q12962 218 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 WLSQ5T9L3 541 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 STRADAQ7RTN6 431 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 PARVBQ9HBI1 364 aa15.66■□□□□ 0.1
TIMP3-201ENST00000266085 SPG21Q9NZD8 308 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms