RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 NAXDQ8IW45 347 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 STK40Q8N2I9 435 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 KDF1Q8NAX2 398 aaPredicted RBP10.02□□□□□ -0.81
VPS41-201ENST00000265745 TMEM35BQ8NCS4 154 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 FRS2Q8WU20 508 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 GATA6Q92908 595 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 NT5C3BQ969T7 300 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 ALG14Q96F25 216 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 RPRD1AQ96P16 312 aaPredicted RBP10.02□□□□□ -0.81
VPS41-201ENST00000265745 PPP1R9BQ96SB3 815 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 NPY6RQ99463 290 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 FEM1AQ9BSK4 669 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 TM9SF3Q9HD45 589 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 TM7SF3Q9NS93 570 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 LMBRD1Q9NUN5 540 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 RRN3Q9NYV6 651 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 ADAMTS1Q9UHI8 967 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 FNDC3AQ9Y2H6 1198 aaKnown RBP10.02□□□□□ -0.81
VPS41-201ENST00000265745 NEUROG3Q9Y4Z2 214 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 CEP83Q9Y592 693 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 PCDHB9Q9Y5E1 797 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 OR51B4Q9Y5P0 310 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 FHOD1Q9Y613 1164 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 HS3ST4Q9Y661 456 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 ITIH6Q6UXX5 1313 aa10.02□□□□□ -0.81
VPS41-201ENST00000265745 PCNX2A6NKB5 2137 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 KNL1Q8NG31 2342 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 USP24Q9UPU5 2620 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 A0A1W2PP55 124 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 FAM221BA6H8Z2 402 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 I6L893 689 aaPredicted RBP10.01□□□□□ -0.81
VPS41-201ENST00000265745 CLDN11O75508 207 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 DAB1O75553 588 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 RNASEH2AO75792 299 aaKnown RBP10.01□□□□□ -0.81
VPS41-201ENST00000265745 ADCY5O95622 1261 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 F9P00740 461 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 VAV1P15498 845 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 GOT1P17174 413 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 TFE3P19532 575 aaPredicted RBP10.01□□□□□ -0.81
VPS41-201ENST00000265745 C5AR1P21730 350 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 SCNN1AP37088 669 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 NNMTP40261 264 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 GRIA4P48058 902 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 CXCR3P49682 368 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 IRAK1P51617 712 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 RNASE9P60153 205 aaKnown RBP10.01□□□□□ -0.81
VPS41-201ENST00000265745 CENPCQ03188 943 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 RAPGEF1Q13905 1077 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 ELAVL3Q14576 367 aaKnown RBP10.01□□□□□ -0.81
VPS41-201ENST00000265745 TEAD4Q15561 434 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 KCNT1Q5JUK3 1230 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 NCEH1Q6PIU2 408 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 RAB44Q7Z6P3 723 aaPredicted RBP10.01□□□□□ -0.81
VPS41-201ENST00000265745 GLRX5Q86SX6 157 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 CHCHD4Q8N4Q1 142 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 AADATQ8N5Z0 425 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 OR52K2Q8NGK3 314 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 OR2T34Q8NGX1 318 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 ENOX1Q8TC92 643 aaKnown RBP10.01□□□□□ -0.81
VPS41-201ENST00000265745 C18orf8Q96DM3 657 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 PGAP3Q96FM1 320 aaPredicted RBP10.01□□□□□ -0.81
VPS41-201ENST00000265745 OMDQ99983 421 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 STK33Q9BYT3 514 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 PDCL3Q9H2J4 239 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 WDCPQ9H6R7 721 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 ANLNQ9NQW6 1124 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 PIGVQ9NUD9 493 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 ARHGEF38Q9NXL2 777 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.01□□□□□ -0.81
VPS41-201ENST00000265745 KLK13Q9UKR3 277 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 PCOLCE2Q9UKZ9 415 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 VANGL2Q9ULK5 521 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 FZD4Q9ULV1 537 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 ANKRD6Q9Y2G4 727 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 TBC1D30Q9Y2I9 924 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 MSRB2Q9Y3D2 182 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 PCDHGB2Q9Y5G2 931 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 SNX11Q9Y5W9 270 aa10.01□□□□□ -0.81
VPS41-201ENST00000265745 KMT2BQ9UMN6 2715 aaPredicted RBP10.01□□□□□ -0.81
VPS41-201ENST00000265745 NUP205Q92621 2012 aa10□□□□□ -0.81
VPS41-201ENST00000265745 A0A1W2PPC4 97 aa10□□□□□ -0.81
VPS41-201ENST00000265745 FAM47DPA6NHR8 397 aa10□□□□□ -0.81
VPS41-201ENST00000265745 LRRC72A6NJI9 287 aa10□□□□□ -0.81
VPS41-201ENST00000265745 BHMG1C9JSJ3 638 aaPredicted RBP10□□□□□ -0.81
VPS41-201ENST00000265745 PES1O00541 588 aaKnown RBP10□□□□□ -0.81
VPS41-201ENST00000265745 KCNK3O14649 394 aa10□□□□□ -0.81
VPS41-201ENST00000265745 ATP9BO43861 1147 aa10□□□□□ -0.81
VPS41-201ENST00000265745 LSM8O95777 96 aaKnown RBP10□□□□□ -0.81
VPS41-201ENST00000265745 ADH1BP00325 375 aa10□□□□□ -0.81
VPS41-201ENST00000265745 EEF1GP26641 437 aaKnown RBP10□□□□□ -0.81
VPS41-201ENST00000265745 GGCXP38435 758 aa10□□□□□ -0.81
VPS41-201ENST00000265745 PSMD8P48556 350 aa10□□□□□ -0.81
VPS41-201ENST00000265745 NUMBP49757 651 aa10□□□□□ -0.81
VPS41-201ENST00000265745 CDH4P55283 916 aa10□□□□□ -0.81
VPS41-201ENST00000265745 RACK1P63244 317 aaKnown RBP10□□□□□ -0.81
VPS41-201ENST00000265745 SUZ12Q15022 739 aaKnown RBP10□□□□□ -0.81
VPS41-201ENST00000265745 SLC25A52Q3SY17 297 aa10□□□□□ -0.81
VPS41-201ENST00000265745 BRMS1LQ5PSV4 323 aa10□□□□□ -0.81
VPS41-201ENST00000265745 TAF3Q5VWG9 929 aa10□□□□□ -0.81
VPS41-201ENST00000265745 DESI1Q6ICB0 168 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms