RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 ITGB8P26012 769 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 NCALDP61601 193 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 PLEKHG4Q58EX7 1191 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 GBP7Q8N8V2 638 aaPredicted RBP17.24■□□□□ 0.35
CHKA-201ENST00000265689 RFWD2Q8NHY2 731 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 FUBP3Q96I24 572 aaKnown RBP eCLIP17.24■□□□□ 0.35
CHKA-201ENST00000265689 TSSK1BQ9BXA7 367 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 SLC39A8Q9C0K1 460 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 BFARQ9NZS9 450 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 MPP6Q9NZW5 540 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 GMIPQ9P107 970 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 CHKBQ9Y259 395 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 PCDHB7Q9Y5E2 793 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 PCDHB5Q9Y5E4 795 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 HS3ST4Q9Y661 456 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 KCNU1A8MYU2 1149 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 ATP9BO43861 1147 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 HOXC13P31276 330 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 TUBP50607 506 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 COG7P83436 770 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 PPP2R5DQ14738 602 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 TIFABQ6ZNK6 161 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 MON1AQ86VX9 555 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 ATPAF2Q8N5M1 289 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 ZNF669Q96BR6 464 aaPredicted RBP17.24■□□□□ 0.35
CHKA-201ENST00000265689 ZNF419Q96HQ0 510 aaPredicted RBP17.24■□□□□ 0.35
CHKA-201ENST00000265689 C8orf48Q96LL4 319 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 CASD1Q96PB1 797 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 MYLK2Q9H1R3 596 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 LRRC40Q9H9A6 602 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 DCTN4Q9UJW0 460 aa17.24■□□□□ 0.35
CHKA-201ENST00000265689 SYN3O14994 580 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 F7P08709 466 aaPredicted RBP17.23■□□□□ 0.35
CHKA-201ENST00000265689 PRMT2P55345 433 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 SPANXN3Q5MJ09 141 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 SPATA22Q8NHS9 363 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 CERS2Q96G23 380 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 MKS1Q9NXB0 559 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 SLC27A5Q9Y2P5 690 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 MYO16Q9Y6X6 1858 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 CEP290O15078 2479 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 VWA8A3KMH1 1905 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 E9PAM4 449 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 ALDOAP04075 364 aaKnown RBP17.23■□□□□ 0.35
CHKA-201ENST00000265689 CCNB1P14635 433 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 CCNCP24863 283 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 CNTFP26441 200 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 HNRNPH1P31943 449 aaKnown RBP17.23■□□□□ 0.35
CHKA-201ENST00000265689 FYB2Q5VWT5 728 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 FAM117BQ6P1L5 589 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 SERPINB11Q96P15 392 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 TSGA13Q96PP4 275 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 HIPK3Q9H422 1215 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 CATSPERBQ9H7T0 1116 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 ZFATQ9P243 1243 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 PRUNE2Q8WUY3 3088 aa17.23■□□□□ 0.35
CHKA-201ENST00000265689 ERI2A8K979 691 aaKnown RBP17.22■□□□□ 0.35
CHKA-201ENST00000265689 FGF10O15520 208 aaPredicted RBP17.22■□□□□ 0.35
CHKA-201ENST00000265689 MAFKO60675 156 aa17.22■□□□□ 0.35
CHKA-201ENST00000265689 CRHR1P34998 444 aa17.22■□□□□ 0.35
CHKA-201ENST00000265689 SLC11A1P49279 550 aa17.22■□□□□ 0.35
CHKA-201ENST00000265689 MRPL58Q14197 206 aaKnown RBP17.22■□□□□ 0.35
CHKA-201ENST00000265689 PIK3R6Q5UE93 754 aa17.22■□□□□ 0.35
CHKA-201ENST00000265689 SLC39A5Q6ZMH5 540 aa17.22■□□□□ 0.35
CHKA-201ENST00000265689 ERP27Q96DN0 273 aa17.22■□□□□ 0.35
CHKA-201ENST00000265689 MFSD3Q96ES6 412 aa17.22■□□□□ 0.35
CHKA-201ENST00000265689 PAWRQ96IZ0 340 aaKnown RBP17.22■□□□□ 0.35
CHKA-201ENST00000265689 FBXO44Q9H4M3 255 aa17.22■□□□□ 0.35
CHKA-201ENST00000265689 MARCH5Q9NX47 278 aa17.22■□□□□ 0.35
CHKA-201ENST00000265689 TRIM33Q9UPN9 1127 aa17.22■□□□□ 0.35
CHKA-201ENST00000265689 TPP1O14773 563 aa17.22■□□□□ 0.35
CHKA-201ENST00000265689 TBX18O95935 607 aa17.22■□□□□ 0.35
CHKA-201ENST00000265689 TROVE2P10155 538 aaKnown RBP eCLIP17.22■□□□□ 0.35
CHKA-201ENST00000265689 GTF2A1P52655 376 aaPredicted RBP17.22■□□□□ 0.35
CHKA-201ENST00000265689 C1QTNF8P60827 252 aa17.22■□□□□ 0.35
CHKA-201ENST00000265689 CCDC15Q0P6D6 951 aa17.22■□□□□ 0.35
CHKA-201ENST00000265689 ANKRD20A4Q4UJ75 823 aa17.22■□□□□ 0.35
CHKA-201ENST00000265689 RSPO2Q6UXX9 243 aaPredicted RBP17.22■□□□□ 0.35
CHKA-201ENST00000265689 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.22■□□□□ 0.357e-6■□□□□ 11
CHKA-201ENST00000265689 TBC1D1Q86TI0 1168 aaPredicted RBP17.22■□□□□ 0.35
CHKA-201ENST00000265689 TMEM135Q86UB9 458 aa17.22■□□□□ 0.35
CHKA-201ENST00000265689 TMEM173Q86WV6 379 aaPredicted RBP17.22■□□□□ 0.35
CHKA-201ENST00000265689 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.22■□□□□ 0.352e-9■■■■■ 76.3
CHKA-201ENST00000265689 ELAC1Q9H777 363 aaKnown RBP17.22■□□□□ 0.35
CHKA-201ENST00000265689 SPTBN5Q9NRC6 3674 aaKnown RBP17.22■□□□□ 0.35
CHKA-201ENST00000265689 ZCWPW2A0A1B0GU75 182 aa17.21■□□□□ 0.35
CHKA-201ENST00000265689 CCDC195A0A1B0GUA6 201 aa17.21■□□□□ 0.35
CHKA-201ENST00000265689 ITGA2BP08514 1039 aa17.21■□□□□ 0.35
CHKA-201ENST00000265689 COL6A1P12109 1028 aa17.21■□□□□ 0.35
CHKA-201ENST00000265689 MLLT6P55198 1093 aaPredicted RBP17.21■□□□□ 0.35
CHKA-201ENST00000265689 IRX4P78413 519 aa17.21■□□□□ 0.35
CHKA-201ENST00000265689 PRPSAP1Q14558 356 aa17.21■□□□□ 0.35
CHKA-201ENST00000265689 SETDB1Q15047 1291 aa17.21■□□□□ 0.35
CHKA-201ENST00000265689 CES4AQ5XG92 561 aa17.21■□□□□ 0.35
CHKA-201ENST00000265689 LRRC37BQ96QE4 947 aa17.21■□□□□ 0.35
CHKA-201ENST00000265689 CRISPLD1Q9H336 500 aa17.21■□□□□ 0.35
CHKA-201ENST00000265689 CHRAC1Q9NRG0 131 aa17.21■□□□□ 0.35
CHKA-201ENST00000265689 TLR6Q9Y2C9 796 aa17.21■□□□□ 0.35
CHKA-201ENST00000265689 MT-CYBP00156 380 aaPredicted RBP17.21■□□□□ 0.35
CHKA-201ENST00000265689 ALDH2P05091 517 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms