RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ANKRD20A4Q4UJ75 823 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 C4orf22Q6V702 233 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 CTU1Q7Z7A3 348 aaKnown RBP20.22■□□□□ 0.83
CSPG5-201ENST00000264723 ASIC4Q96FT7 647 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 COPS7BQ9H9Q2 264 aaPredicted RBP20.22■□□□□ 0.83
CSPG5-201ENST00000264723 NMRAL1Q9HBL8 299 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 EFR3BQ9Y2G0 817 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 BUD23O43709 281 aaKnown RBP20.22■□□□□ 0.83
CSPG5-201ENST00000264723 SNX2O60749 519 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 RANBP1P43487 201 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 CTBP1Q13363 440 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 UGP2Q16851 508 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 SPRYD7Q5W111 196 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 HSFY1Q96LI6 401 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 ARAP2Q8WZ64 1704 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 SUPT7LO94864 414 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 PGAM1P18669 254 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 CCR1P32246 355 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 TTC30AQ86WT1 665 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 KCTD15Q96SI1 283 aaPredicted RBP20.22■□□□□ 0.83
CSPG5-201ENST00000264723 MIPEPQ99797 713 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 MRPL1Q9BYD6 325 aaKnown RBP20.22■□□□□ 0.83
CSPG5-201ENST00000264723 SEMA6AQ9H2E6 1030 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 CAAP1Q9H8G2 361 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 HACD3Q9P035 362 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 NOL3O60936 208 aaKnown RBP20.22■□□□□ 0.83
CSPG5-201ENST00000264723 OR4Q2P0C623 313 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 ABCE1P61221 599 aaKnown RBP20.22■□□□□ 0.83
CSPG5-201ENST00000264723 LRRC23Q53EV4 343 aaPredicted RBP20.22■□□□□ 0.83
CSPG5-201ENST00000264723 FRA10AC1Q70Z53 315 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 DIS3LQ8TF46 1054 aaKnown RBP20.22■□□□□ 0.83
CSPG5-201ENST00000264723 SOCS4Q8WXH5 440 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 EFHD1Q9BUP0 239 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 KLHL4Q9C0H6 718 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 SNX15Q9NRS6 342 aa20.22■□□□□ 0.83
CSPG5-201ENST00000264723 CORO1CQ9ULV4 474 aaPredicted RBP20.22■□□□□ 0.83
CSPG5-201ENST00000264723 NT5C1B-RDH14C9J2C7 533 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 AKAP10O43572 662 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 NELFEP18615 380 aaKnown RBP20.21■□□□□ 0.83
CSPG5-201ENST00000264723 FGFR3P22607 806 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 GCAP28676 217 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 MRPS6P82932 125 aaKnown RBP20.21■□□□□ 0.83
CSPG5-201ENST00000264723 ARFGAP1Q8N6T3 406 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 GIPC2Q8TF65 315 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 UPF3AQ9H1J1 476 aaKnown RBP20.21■□□□□ 0.83
CSPG5-201ENST00000264723 ZNF212Q9UDV6 495 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 PDAP1Q13442 181 aaKnown RBP20.21■□□□□ 0.83
CSPG5-201ENST00000264723 CYLC2Q14093 348 aaPredicted RBP20.21■□□□□ 0.83
CSPG5-201ENST00000264723 KYAT3Q6YP21 454 aaKnown RBP20.21■□□□□ 0.83
CSPG5-201ENST00000264723 TREML1Q86YW5 311 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 LRRC52Q8N7C0 313 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 SNX31Q8N9S9 440 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 AGAP2Q99490 1192 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 NMRK2Q9NPI5 230 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 PRKAG2Q9UGJ0 569 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 ANXA9O76027 345 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 T-ENOLP0DO92 83 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 CRYBB1P53674 252 aaPredicted RBP20.21■□□□□ 0.83
CSPG5-201ENST00000264723 CSE1LP55060 971 aaKnown RBP20.21■□□□□ 0.83
CSPG5-201ENST00000264723 CCDC142Q17RM4 750 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 OLFML2BQ68BL8 750 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 ANO7Q6IWH7 933 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 EGFL8Q99944 293 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 ZNF670Q9BS34 389 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 SNX13Q9Y5W8 968 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 TEX264Q9Y6I9 313 aa20.21■□□□□ 0.83
CSPG5-201ENST00000264723 FGFR1P11362 822 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 NFKB1P19838 968 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 PRKD1Q15139 912 aaPredicted RBP20.2■□□□□ 0.82
CSPG5-201ENST00000264723 LRRC39Q96DD0 335 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 MCRS1Q96EZ8 462 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 R3HDMLQ9H3Y0 253 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 PIF1Q9H611 641 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 CHRAC1Q9NRG0 131 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 ACOT9Q9Y305 439 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 STYXL1Q9Y6J8 313 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 OAS1P00973 400 aaKnown RBP20.2■□□□□ 0.82
CSPG5-201ENST00000264723 NEK3P51956 506 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 SOWAHAQ2M3V2 549 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 RGMBQ6NW40 437 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 CLIC5Q9NZA1 410 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 DTLQ9NZJ0 730 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 CCDC167Q9P0B6 97 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 FARP1Q9Y4F1 1045 aaPredicted RBP20.2■□□□□ 0.82
CSPG5-201ENST00000264723 ATP6AP2A0A1C7CYW4 349 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 E7ENQ6 273 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 ATP6AP2O75787 350 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 PIGRP01833 764 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 HARS2P49590 506 aaKnown RBP20.2■□□□□ 0.82
CSPG5-201ENST00000264723 NRF1Q16656 503 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 FBXO27Q8NI29 283 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 KCTD4Q8WVF5 259 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 NAT9Q9BTE0 207 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 PDLIM7Q9NR12 457 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 DDX18Q9NVP1 670 aaKnown RBP20.2■□□□□ 0.82
CSPG5-201ENST00000264723 SFMBT1Q9UHJ3 866 aa20.2■□□□□ 0.82
CSPG5-201ENST00000264723 NDUFS3O75489 264 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 ALDH2P05091 517 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 THRAP10827 490 aa20.19■□□□□ 0.82
CSPG5-201ENST00000264723 PRKAR2AP13861 404 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms