RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 ANGPTL2Q9UKU9 493 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 DNAJC16Q9Y2G8 782 aa16.63■□□□□ 0.25
CTCF-201ENST00000264010 CXorf49A8MYA2 514 aaPredicted RBP16.62■□□□□ 0.25
CTCF-201ENST00000264010 TPP1O14773 563 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 KDM1AO60341 852 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 CSH1P0DML2 217 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 CSH2P0DML3 217 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 GLUD2P49448 558 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 DNAL1Q4LDG9 190 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 ZNF567Q8N184 647 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 CENPIQ92674 756 aaPredicted RBP16.62■□□□□ 0.25
CTCF-201ENST00000264010 LRMDAQ9H2I8 198 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 SP110Q9HB58 689 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 IARS2Q9NSE4 1012 aaKnown RBP16.62■□□□□ 0.25
CTCF-201ENST00000264010 NDE1Q9NXR1 346 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 PRG3Q9Y2Y8 225 aaPredicted RBP16.62■□□□□ 0.25
CTCF-201ENST00000264010 ARL5CA6NH57 179 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 CPA3P15088 417 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 KRT80Q6KB66 452 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 RNF180Q86T96 592 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 LZTR1Q8N653 840 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 SMG8Q8ND04 991 aaKnown RBP16.62■□□□□ 0.25
CTCF-201ENST00000264010 PTPRN2Q92932 1015 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 NTAN1Q96AB6 310 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 VPS39Q96JC1 886 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 SIGLEC10Q96LC7 697 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 TBC1D10AQ9BXI6 508 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 PIGVQ9NUD9 493 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 NR2E3Q9Y5X4 410 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 FAM237BA0A1B0GVD1 139 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 SERPINE1P05121 402 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 SLC2A3P11169 496 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 RALBP11234 206 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 CYLC2Q14093 348 aaPredicted RBP16.62■□□□□ 0.25
CTCF-201ENST00000264010 MAGEC3Q8TD91 643 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 KCNK16Q96T55 309 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 MECRQ9BV79 373 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 TASP1Q9H6P5 420 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 CDY1Q9Y6F8 540 aa16.62■□□□□ 0.25
CTCF-201ENST00000264010 TPH1P17752 444 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 DNAJB2P25686 324 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 GRIA1P42261 906 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 BRCC3P46736 316 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 INTS6LQ5JSJ4 861 aaKnown RBP16.61■□□□□ 0.25
CTCF-201ENST00000264010 MORN1Q5T089 497 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 UBXN11Q5T124 520 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 TIGD7Q6NT04 549 aaPredicted RBP16.61■□□□□ 0.25
CTCF-201ENST00000264010 KDELC2Q7Z4H8 507 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 CLNKQ7Z7G1 428 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 MPP5Q8N3R9 675 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 UROC1Q96N76 676 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 NDNQ99608 321 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 BTBD10Q9BSF8 475 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 CXCL16Q9H2A7 254 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 EURLQ9NYK6 297 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 FBXW11Q9UKB1 542 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 ITGA2BP08514 1039 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 NFKB1P19838 968 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 ATXN3P54252 364 aaPredicted RBP16.61■□□□□ 0.25
CTCF-201ENST00000264010 SLC10A2Q12908 348 aaPredicted RBP16.61■□□□□ 0.25
CTCF-201ENST00000264010 WASHC2DQ5SRD0 308 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 ZCCHC23Q6ZST2 131 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 ZBTB46Q86UZ6 589 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 PTPN18Q99952 460 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 ARHGEF3Q9NR81 526 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 ABCC13Q9NSE7 274 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 FAM159BA6NKW6 160 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 PMPCBO75439 489 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 APOA4P06727 396 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 BPGMP07738 259 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 HOXD10P28358 340 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 GRIK3Q13003 919 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 TUSC3Q13454 348 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 NFE2Q16621 373 aaPredicted RBP16.61■□□□□ 0.25
CTCF-201ENST00000264010 KCNMB4Q86W47 210 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 IRGQQ8WZA9 623 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 GLT1D1Q96MS3 346 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 IL22Q9GZX6 179 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 IGSF9Q9P2J2 1179 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 CACNG4Q9UBN1 327 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 ADAM28Q9UKQ2 775 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 PADI3Q9ULW8 664 aa16.61■□□□□ 0.25
CTCF-201ENST00000264010 MPOP05164 745 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 KCNA4P22459 653 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 CCDC153Q494R4 210 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 KLC3Q6P597 504 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 ALKAL1Q6UXT8 129 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 HFE2Q6ZVN8 426 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 GTF2IRD1Q9UHL9 959 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 CFLARO15519 480 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 UGT1A9O60656 530 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 ATP5BP06576 529 aaKnown RBP16.6■□□□□ 0.25
CTCF-201ENST00000264010 CPB1P15086 417 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 SLC1A6P48664 564 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 NEK3P51956 506 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 RABGGTBP53611 331 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 MED21Q13503 144 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 GALNTL6Q49A17 601 aa16.6■□□□□ 0.25
CTCF-201ENST00000264010 MARK2Q7KZI7 788 aaKnown RBP16.6■□□□□ 0.25
CTCF-201ENST00000264010 PPWD1Q96BP3 646 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms