RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 GRIA4P48058 902 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 MPP3Q13368 585 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 CYLC2Q14093 348 aaPredicted RBP12.65□□□□□ -0.38
CHMP3-201ENST00000263856 SEL1L3Q68CR1 1132 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 TIFABQ6ZNK6 161 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 KYQ8NBH2 561 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 ACMSDQ8TDX5 336 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 KCTD4Q8WVF5 259 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 CELF6Q96J87 481 aaKnown RBP12.65□□□□□ -0.38
CHMP3-201ENST00000263856 SERPINI1Q99574 410 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 CYP4F12Q9HCS2 524 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 ERAP1Q9NZ08 941 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 PCDHB12Q9Y5F1 795 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 CEP350Q5VT06 3117 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 SHROOM3Q8TF72 1996 aa12.65□□□□□ -0.38
CHMP3-201ENST00000263856 H3BNX3 289 aa12.65□□□□□ -0.39
CHMP3-201ENST00000263856 CRTAMO95727 393 aa12.65□□□□□ -0.39
CHMP3-201ENST00000263856 TGFB3P10600 412 aa12.65□□□□□ -0.39
CHMP3-201ENST00000263856 NR2C2P49116 596 aa12.65□□□□□ -0.39
CHMP3-201ENST00000263856 MTTPP55157 894 aa12.65□□□□□ -0.39
CHMP3-201ENST00000263856 POU5F1BQ06416 359 aa12.65□□□□□ -0.39
CHMP3-201ENST00000263856 DALRD3Q5D0E6 543 aaKnown RBP12.65□□□□□ -0.39
CHMP3-201ENST00000263856 RPS27LQ71UM5 84 aaKnown RBP12.65□□□□□ -0.39
CHMP3-201ENST00000263856 KCNMB4Q86W47 210 aa12.65□□□□□ -0.39
CHMP3-201ENST00000263856 CXorf38Q8TB03 319 aa12.65□□□□□ -0.39
CHMP3-201ENST00000263856 SLC7A14Q8TBB6 771 aa12.65□□□□□ -0.39
CHMP3-201ENST00000263856 C12orf42Q96LP6 360 aa12.65□□□□□ -0.39
CHMP3-201ENST00000263856 SLC4A5Q9BY07 1137 aa12.65□□□□□ -0.39
CHMP3-201ENST00000263856 ANLNQ9NQW6 1124 aa12.65□□□□□ -0.39
CHMP3-201ENST00000263856 UBAP1Q9NZ09 502 aa12.65□□□□□ -0.39
CHMP3-201ENST00000263856 CACNG4Q9UBN1 327 aa12.65□□□□□ -0.39
CHMP3-201ENST00000263856 RUVBL2Q9Y230 463 aaKnown RBP12.65□□□□□ -0.39
CHMP3-201ENST00000263856 IGKV6-21A0A0C4DH24 114 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 A0A1B0GTW7 788 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 C22orf31O95567 290 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 INCA1Q0VD86 236 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 NADK2Q4G0N4 442 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 ARL13AQ5H913 290 aaPredicted RBP12.64□□□□□ -0.39
CHMP3-201ENST00000263856 PGM2L1Q6PCE3 622 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 CYP2R1Q6VVX0 501 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 CATSPER4Q7RTX7 472 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 TMEM110Q86TL2 294 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 PNPLA1Q8N8W4 532 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 RBBP8Q99708 897 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 CPNE1Q99829 537 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 MRPL1Q9BYD6 325 aaKnown RBP12.64□□□□□ -0.39
CHMP3-201ENST00000263856 ACE2Q9BYF1 805 aaPredicted RBP12.64□□□□□ -0.39
CHMP3-201ENST00000263856 VPS33BQ9H267 617 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 Q9H521 79 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 FAM96AQ9H5X1 160 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 PSMD13Q9UNM6 376 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 GNEQ9Y223 722 aaKnown RBP12.64□□□□□ -0.39
CHMP3-201ENST00000263856 COMMD3-BMI1R4GMX3 469 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 DPYSL4O14531 572 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 ZNF195O14628 629 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 GNL1P36915 607 aaPredicted RBP12.64□□□□□ -0.39
CHMP3-201ENST00000263856 MAGEA6P43360 314 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 SNX16P57768 344 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 BST2Q10589 180 aaKnown RBP12.64□□□□□ -0.39
CHMP3-201ENST00000263856 CCDC153Q494R4 210 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 GRTP1Q5TC63 336 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 POTEAQ6S8J7 498 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 EPGNQ6UW88 154 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 AMIGO2Q86SJ2 522 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 SLC41A1Q8IVJ1 513 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 EME1Q96AY2 570 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 PPWD1Q96BP3 646 aaKnown RBP12.64□□□□□ -0.39
CHMP3-201ENST00000263856 VPS39Q96JC1 886 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 MPHOSPH6Q99547 160 aaKnown RBP12.64□□□□□ -0.39
CHMP3-201ENST00000263856 SIKE1Q9BRV8 207 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 EIF2AQ9BY44 585 aaKnown RBP12.64□□□□□ -0.39
CHMP3-201ENST00000263856 TRPV6Q9H1D0 765 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 LRRC40Q9H9A6 602 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 WDR41Q9HAD4 459 aa12.64□□□□□ -0.39
CHMP3-201ENST00000263856 ANKRD12Q6UB98 2062 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 FAM72CH0Y354 149 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 ZBTB24O43167 697 aaPredicted RBP12.63□□□□□ -0.39
CHMP3-201ENST00000263856 THRAP10827 490 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 PLK1P53350 603 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 ZNF280AP59817 542 aaPredicted RBP12.63□□□□□ -0.39
CHMP3-201ENST00000263856 USP46P62068 366 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 MS4A2Q01362 244 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 GRM3Q14832 879 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 FAM72AQ5TYM5 149 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 SYPL2Q5VXT5 272 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 FAM72DQ6L9T8 149 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 UGT2A3Q6UWM9 527 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 C4orf22Q6V702 233 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 MOB2Q70IA6 237 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 KBTBD6Q86V97 674 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 FAM72BQ86X60 149 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 RIOX2Q8IUF8 465 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 AFG1LQ8WV93 481 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 SUDS3Q9H7L9 328 aaPredicted RBP12.63□□□□□ -0.39
CHMP3-201ENST00000263856 LRRC4Q9HBW1 653 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 TXNRD2Q9NNW7 524 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 ZDHHC2Q9UIJ5 367 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 CSADQ9Y600 493 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 TSPAN1O60635 241 aa12.63□□□□□ -0.39
CHMP3-201ENST00000263856 PFDN1O60925 122 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms