RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 POLR2LP62875 67 aaKnown RBP11.56□□□□□ -0.56
PTPN4-201ENST00000263708 NAA30Q147X3 362 aaPredicted RBP11.56□□□□□ -0.56
PTPN4-201ENST00000263708 CRY1Q16526 586 aa11.56□□□□□ -0.56
PTPN4-201ENST00000263708 TCF7L2Q9NQB0 619 aa11.56□□□□□ -0.56
PTPN4-201ENST00000263708 DMGDHQ9UI17 866 aaKnown RBP11.56□□□□□ -0.56
PTPN4-201ENST00000263708 ATXN2Q99700 1313 aaKnown RBP11.56□□□□□ -0.56
PTPN4-201ENST00000263708 CLOCKO15516 846 aa11.56□□□□□ -0.56
PTPN4-201ENST00000263708 RAMP2O60895 175 aa11.56□□□□□ -0.56
PTPN4-201ENST00000263708 TPH1P17752 444 aa11.56□□□□□ -0.56
PTPN4-201ENST00000263708 CES1P23141 567 aa11.56□□□□□ -0.56
PTPN4-201ENST00000263708 TCEA1P23193 301 aaKnown RBP11.56□□□□□ -0.56
PTPN4-201ENST00000263708 CCR1P32246 355 aa11.56□□□□□ -0.56
PTPN4-201ENST00000263708 AP1S1P61966 158 aa11.56□□□□□ -0.56
PTPN4-201ENST00000263708 MARC1Q5VT66 337 aa11.56□□□□□ -0.56
PTPN4-201ENST00000263708 POMZP3Q6PJE2 187 aa11.56□□□□□ -0.56
PTPN4-201ENST00000263708 SHC4Q6S5L8 630 aa11.56□□□□□ -0.56
PTPN4-201ENST00000263708 CLEC10AQ8IUN9 316 aa11.56□□□□□ -0.56
PTPN4-201ENST00000263708 REXO1L1PQ8IX06 675 aa11.56□□□□□ -0.56
PTPN4-201ENST00000263708 METTL6Q8TCB7 284 aa11.56□□□□□ -0.56
PTPN4-201ENST00000263708 SYTL5Q8TDW5 730 aaPredicted RBP11.56□□□□□ -0.56
PTPN4-201ENST00000263708 MXRA8Q9BRK3 442 aa11.56□□□□□ -0.56
PTPN4-201ENST00000263708 FBXO21O94952 628 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 MYBPC2Q14324 1141 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 ATP13A4Q4VNC1 1196 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 ATG14Q6ZNE5 492 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 ZNF483Q8TF39 744 aaPredicted RBP11.55□□□□□ -0.56
PTPN4-201ENST00000263708 PAFAH2Q99487 392 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 C7orf25Q9BPX7 421 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 THAP2Q9H0W7 228 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 ARMCX1Q9P291 453 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 CLEC4AQ9UMR7 237 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 LAMC1P11047 1609 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 WDR27A2RRH5 827 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 ARFIP1P53367 373 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 ADIGQ0VDE8 80 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 MYBPC3Q14896 1274 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 THOC7Q6I9Y2 204 aaKnown RBP11.55□□□□□ -0.56
PTPN4-201ENST00000263708 KCNMB4Q86W47 210 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 HIPK1Q86Z02 1210 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 CCNJLQ8IV13 435 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 LRRC34Q8IZ02 419 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 SUSD6Q92537 303 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 OPTCQ9UBM4 332 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 ARHGAP31Q2M1Z3 1444 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 RPA3P35244 121 aaPredicted RBP11.55□□□□□ -0.56
PTPN4-201ENST00000263708 TKTL1P51854 596 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 BCL2L1Q07817 233 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 INO80DQ53TQ3 878 aaPredicted RBP11.55□□□□□ -0.56
PTPN4-201ENST00000263708 SP8Q8IXZ3 490 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 TMEM39BQ9GZU3 492 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 FCHO1O14526 889 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 SRGNP10124 158 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 GCLCP48506 637 aaPredicted RBP11.55□□□□□ -0.56
PTPN4-201ENST00000263708 HYIQ5T013 277 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 FAM171A1Q5VUB5 890 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 ATP6V1C2Q8NEY4 427 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 OR10G6Q8NH81 332 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 FRMD8P1Q9BZ68 369 aaPredicted RBP11.55□□□□□ -0.56
PTPN4-201ENST00000263708 AASDHPPTQ9NRN7 309 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 TAS2R13Q9NYV9 303 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 XPR1Q9UBH6 696 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 E7ENQ6 273 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 PSMD9O00233 223 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 LCA5LO95447 670 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 NDUFB10O96000 172 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 ITIH4Q14624 930 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 RP9Q8TA86 221 aaKnown RBP11.55□□□□□ -0.56
PTPN4-201ENST00000263708 OSBPL3Q9H4L5 887 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 NDUFA13Q9P0J0 144 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 CROTQ9UKG9 612 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 ING4Q9UNL4 249 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 PSMD13Q9UNM6 376 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 SLC12A4Q9UP95 1085 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 TAS2R41P59536 307 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 GRSF1Q12849 480 aaKnown RBP eCLIP11.55□□□□□ -0.56
PTPN4-201ENST00000263708 AP5B1Q2VPB7 878 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 ZNF276Q8N554 614 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 USP38Q8NB14 1042 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 ATL1Q8WXF7 558 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 FBXO44Q9H4M3 255 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 SH3D21A4FU49 640 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 TEX46H3BTG2 121 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 AMHP03971 560 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 PLK1P53350 603 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 QPRTQ15274 297 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 FBXO16Q8IX29 292 aaPredicted RBP11.55□□□□□ -0.56
PTPN4-201ENST00000263708 PEX5LQ8IYB4 626 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 CHST13Q8NET6 341 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 IDI2Q9BXS1 227 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 ISCUQ9H1K1 167 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 RPS6KA6Q9UK32 745 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 CCDC162PA2VCL2 907 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 SGTAO43765 313 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 CD151P48509 253 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 SNRPFP62306 86 aaKnown RBP11.55□□□□□ -0.56
PTPN4-201ENST00000263708 SPIRE1Q08AE8 756 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 PTGES3Q15185 160 aaKnown RBP11.55□□□□□ -0.56
PTPN4-201ENST00000263708 TBL1YQ9BQ87 522 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 ATP13A1Q9HD20 1204 aa11.55□□□□□ -0.56
PTPN4-201ENST00000263708 TRIM17Q9Y577 477 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms