RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 TRPV4Q9HBA0 871 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 SPHK2Q9NRA0 654 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 HOMER3Q9NSC5 361 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 SEPT10Q9P0V9 454 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 DRG1Q9Y295 367 aaKnown RBP9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 ACTL7AQ9Y615 435 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 UNC80Q8N2C7 3258 aa9.98□□□□□ -0.81
SNRNP40-201ENST00000263694 A0A1B0GVM2 712 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 ESYT3A0FGR9 886 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 TCAF2A6NFQ2 919 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 F5H423 210 aaPredicted RBP9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 H0Y626 953 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 J3KR12 359 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 KCNK1O00180 336 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 TRIM24O15164 1050 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 KCNN4O15554 427 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 CLDN11O75508 207 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 CYP17A1P05093 508 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 ITGAVP06756 1048 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 GLDCP23378 1020 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 MZF1P28698 734 aaPredicted RBP9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 SERPINB6P35237 376 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 GARSP41250 739 aaKnown RBP9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 IFNAR2P48551 515 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 TFF2Q03403 129 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 POLD3Q15054 466 aaPredicted RBP9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 PDK1Q15118 436 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 SLC45A4Q5BKX6 768 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 CXorf57Q6NSI4 855 aaKnown RBP9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 DRICH1Q6PGQ1 229 aaPredicted RBP9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 CHST9Q7L1S5 443 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 LZTR1Q8N653 840 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 ALLCQ8N6M5 410 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 CCDC26Q8TAB7 109 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 USP33Q8TEY7 942 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 OSCP1Q8WVF1 389 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 TFB1MQ8WVM0 346 aaKnown RBP9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 UBXN4Q92575 508 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 HLA-CQ95604 372 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 QKIQ96PU8 341 aaKnown RBP eCLIP9.97□□□□□ -0.814e-23■■■■□ 21.7
SNRNP40-201ENST00000263694 SPON2Q9BUD6 331 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 BBS2Q9BXC9 721 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 DPH5Q9H2P9 285 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 ANKZF1Q9H8Y5 726 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 PRDM16Q9HAZ2 1276 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 TBC1D14Q9P2M4 693 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 MIA3Q5JRA6 1907 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 BCLAF3A2AJT9 711 aaKnown RBP9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 C2CD4DB7Z1M9 353 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 MAFKO60675 156 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 RAMP2O60895 175 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 HEXIM1O94992 359 aaKnown RBP9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 LUC7L3O95232 432 aaKnown RBP9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 ECEL1O95672 775 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 KRT14P02533 472 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 RHOCP08134 193 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 TYRP14679 529 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 CD70P32970 193 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 MAPKAPK2P49137 400 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 NDST2P52849 883 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 GNA12Q03113 381 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 XRCC4Q13426 336 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 SMAD4Q13485 552 aaKnown RBP9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 PRKD1Q15139 912 aaPredicted RBP9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 DHCR24Q15392 516 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 PPP1R7Q15435 360 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 ELF2Q15723 593 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 MFN1Q8IWA4 741 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 MFSD6LQ8IWD5 586 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 APCDD1Q8J025 514 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 ATPAF2Q8N5M1 289 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 CCDC110Q8TBZ0 833 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 ARHGEF2Q92974 986 aaKnown RBP9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 NECTIN4Q96NY8 510 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 PNKPQ96T60 521 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 FAM83CQ9BQN1 747 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 FRMD8P1Q9BZ68 369 aaPredicted RBP9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 HPS4Q9NQG7 708 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 TBC1D30Q9Y2I9 924 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 NEU2Q9Y3R4 380 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 NUMBLQ9Y6R0 609 aa9.97□□□□□ -0.81
SNRNP40-201ENST00000263694 TYW5A2RUC4 315 aaKnown RBP9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 SLC9A3R1O14745 358 aaPredicted RBP9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 PPP1R12AO14974 1030 aaPredicted RBP9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 SNAP91O60641 907 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 PENKP01210 267 aaPredicted RBP9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 JCHAINP01591 159 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 CYBBP04839 570 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 MX2P20592 715 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 GDI1P31150 447 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 RPL22P35268 128 aaKnown RBP9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 CSKP41240 450 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 GUCY2DQ02846 1103 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 PPIDQ08752 370 aaKnown RBP9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 MESP2Q0VG99 397 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 WASHC5Q12768 1159 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 LMAN2Q12907 356 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 ZBTB17Q13105 803 aa9.96□□□□□ -0.82
SNRNP40-201ENST00000263694 SERINC3Q13530 473 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms