RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 PARNO95453 639 aaKnown RBP17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 TSPAN19P0C672 248 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 MYL4P12829 197 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 RAB27AP51159 221 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 KATNAL2Q8IYT4 538 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 EMC1Q8N766 993 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 BBS4Q96RK4 519 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 DIP2CQ9Y2E4 1556 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 CYP20A1Q6UW02 462 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 NET1Q7Z628 596 aaPredicted RBP17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 S100A13Q99584 98 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 WWP2O00308 870 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 MAPK11Q15759 364 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 LGALS3BPQ08380 585 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 FGD3Q5JSP0 725 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 FBXO42Q6P3S6 717 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 NUAK2Q9H093 628 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 FBXO28Q9NVF7 368 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 ZNF232Q9UNY5 417 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 COMMD2Q86X83 199 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 PALB2Q86YC2 1186 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 CAMK1DQ8IU85 385 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 SEMA4DQ92854 862 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 A0A088AWK7 358 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 APOC4-APOC2K7ER74 178 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 FSBPO95073 299 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 APOC2P02655 101 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 HMGCRP04035 888 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 ZNF10P21506 573 aaPredicted RBP17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 GMPSP49915 693 aaPredicted RBP17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 HGH1Q9BTY7 390 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 GUCY1B2O75343 617 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 ZNF286BP0CG31 522 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 ARP10275 920 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 SSTR1P30872 391 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 SLC12A3P55017 1021 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 METTL7BQ6UX53 244 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 MILR1Q7Z6M3 343 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 NACC2Q96BF6 587 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 RPS6KA6Q9UK32 745 aa17.75■□□□□ 0.43
NOTCH3-201ENST00000263388 ZNF24P17028 368 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 RFX5P48382 616 aaPredicted RBP17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 NDST1P52848 882 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 TOP3AQ13472 1001 aaPredicted RBP17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 FNIP1Q8TF40 1166 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 LRRC4BQ9NT99 713 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 DDX43Q9NXZ2 648 aaKnown RBP17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 PCDHGA4Q9Y5G9 962 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 C1orf167Q5SNV9 1468 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 USP7Q93009 1102 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 ELOVL4Q9GZR5 314 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 CEP170BQ9Y4F5 1589 aaPredicted RBP17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 CXCL8P10145 99 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 PROCP04070 461 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 TSHZ1Q6ZSZ6 1077 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 CLVS1Q8IUQ0 354 aaPredicted RBP17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 MTMR8Q96EF0 704 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 PGM2Q96G03 612 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 Q96MT0 163 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 COMMD9Q9P000 198 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 BTBD3Q9Y2F9 522 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 PCDHB12Q9Y5F1 795 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 CCDC182A6NF36 153 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 BCAP31P51572 246 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 ADARP55265 1226 aaKnown RBP17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 FBXO16Q8IX29 292 aaPredicted RBP17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 ARRDC4Q8NCT1 418 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 ENTPD4Q9Y227 616 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 SIK3Q9Y2K2 1263 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 JCADQ9P266 1359 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 H3BQF6 201 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 SLC45A4Q5BKX6 768 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 TCEAL5Q5H9L2 206 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 TRMT11Q7Z4G4 463 aaKnown RBP17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 MAGEB10Q96LZ2 347 aaPredicted RBP17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 POMKQ9H5K3 350 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 OPTCQ9UBM4 332 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 TUBP50607 506 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 BMPR2Q13873 1038 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 RRP1BQ14684 758 aaKnown RBP17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 SYTL1Q8IYJ3 562 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 SLC5A5Q92911 643 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 CDRT15Q96T59 188 aa17.74■□□□□ 0.43
NOTCH3-201ENST00000263388 RBAK-RBAKDNI3L0D1 243 aa17.73■□□□□ 0.43
NOTCH3-201ENST00000263388 S100GP29377 79 aa17.73■□□□□ 0.43
NOTCH3-201ENST00000263388 LIN54Q6MZP7 749 aa17.73■□□□□ 0.43
NOTCH3-201ENST00000263388 C8orf59Q8N0T1 100 aaPredicted RBP17.73■□□□□ 0.43
NOTCH3-201ENST00000263388 BHLHE22Q8NFJ8 381 aaPredicted RBP17.73■□□□□ 0.43
NOTCH3-201ENST00000263388 OR7A2PQ8NGA2 310 aa17.73■□□□□ 0.43
NOTCH3-201ENST00000263388 CYLDQ9NQC7 956 aa17.73■□□□□ 0.43
NOTCH3-201ENST00000263388 TMX2Q9Y320 296 aa17.73■□□□□ 0.43
NOTCH3-201ENST00000263388 LBPP18428 481 aa17.73■□□□□ 0.43
NOTCH3-201ENST00000263388 PAGE2BQ5JRK9 111 aa17.73■□□□□ 0.43
NOTCH3-201ENST00000263388 OVOS1Q6IE37 1185 aa17.73■□□□□ 0.43
NOTCH3-201ENST00000263388 ZNF621Q6ZSS3 439 aa17.73■□□□□ 0.43
NOTCH3-201ENST00000263388 SNAP91O60641 907 aa17.73■□□□□ 0.43
NOTCH3-201ENST00000263388 IL2P60568 153 aa17.73■□□□□ 0.43
NOTCH3-201ENST00000263388 INTS11Q5TA45 600 aaKnown RBP17.73■□□□□ 0.43
NOTCH3-201ENST00000263388 IRGCQ6NXR0 463 aa17.73■□□□□ 0.43
NOTCH3-201ENST00000263388 NIPA1Q7RTP0 329 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms