RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 SLC46A2Q9BY10 475 aa13.32□□□□□ -0.28
VAMP7-201ENST00000262640 EIF2B3Q9NR50 452 aaKnown RBP13.32□□□□□ -0.28
VAMP7-201ENST00000262640 IPO11Q9UI26 975 aaKnown RBP13.32□□□□□ -0.28
VAMP7-201ENST00000262640 E7ESA3 106 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 H0YGN5 161 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 ALOX15BO15296 676 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 GREM1O60565 184 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 TTC4O95801 387 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 CCNB1P14635 433 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 CBLBQ13191 982 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 POLD3Q15054 466 aaPredicted RBP13.31□□□□□ -0.28
VAMP7-201ENST00000262640 FAM182AQ5T1J6 154 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 GPR158Q5T848 1215 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 KRT222Q8N1A0 295 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 CFAP52Q8N1V2 620 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 GDPD5Q8WTR4 605 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 TEKT5Q96M29 485 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 TTC25Q96NG3 672 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 GBA3Q9H227 469 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 NINJ2Q9NZG7 142 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 ZMYM5Q9UJ78 669 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 ARHGAP26Q9UNA1 814 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 SH3BP1Q9Y3L3 701 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 NFS1Q9Y697 457 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 A0A1B0GVM2 712 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 TCAF2A6NFQ2 919 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 NRG2O14511 850 aaPredicted RBP13.31□□□□□ -0.28
VAMP7-201ENST00000262640 JCHAINP01591 159 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 PSMB4P28070 264 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 LMAN1P49257 510 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 ZXDBP98169 803 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 GAD2Q05329 585 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 PDIA2Q13087 525 aaKnown RBP13.31□□□□□ -0.28
VAMP7-201ENST00000262640 FNBP1LQ5T0N5 605 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 STXBP5Q5T5C0 1151 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 HTR3DQ70Z44 454 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 FAM217AQ8IXS0 508 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 ZSCAN18Q8TBC5 510 aaPredicted RBP13.31□□□□□ -0.28
VAMP7-201ENST00000262640 TCEAL4Q96EI5 215 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 IL12RB2Q99665 862 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 TASP1Q9H6P5 420 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 CFAP97Q9P2B7 532 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 RSPH14Q9UHP6 348 aa13.31□□□□□ -0.28
VAMP7-201ENST00000262640 CCDC195A0A1B0GUA6 201 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 ZNF197O14709 1029 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 ZBTB24O43167 697 aaPredicted RBP13.3□□□□□ -0.28
VAMP7-201ENST00000262640 MOSPD3O75425 235 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 BMP8BP34820 402 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 RPS24P62847 133 aaKnown RBP13.3□□□□□ -0.28
VAMP7-201ENST00000262640 SARNPP82979 210 aaKnown RBP13.3□□□□□ -0.28
VAMP7-201ENST00000262640 SLC29A2Q14542 456 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 TEAD2Q15562 447 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 C6orf118Q5T5N4 469 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 GOLGA6L1Q8N7Z2 621 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 MAML1Q92585 1016 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 ZNF707Q96C28 371 aaPredicted RBP13.3□□□□□ -0.28
VAMP7-201ENST00000262640 PKNOX2Q96KN3 472 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 AGAP3Q96P47 875 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 SERPINB12Q96P63 405 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 CDCA3Q99618 268 aaPredicted RBP13.3□□□□□ -0.28
VAMP7-201ENST00000262640 SH3GL2Q99962 352 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 CHD9Q3L8U1 2897 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.3□□□□□ -0.28
VAMP7-201ENST00000262640 TYW5A2RUC4 315 aaKnown RBP13.3□□□□□ -0.28
VAMP7-201ENST00000262640 TRDMT1O14717 391 aaKnown RBP13.3□□□□□ -0.28
VAMP7-201ENST00000262640 TSPAN3O60637 253 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 AVPR1AP37288 418 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 NRIP1P48552 1158 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 IFFO1Q0D2I5 559 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 ZNF177Q13360 481 aaPredicted RBP13.3□□□□□ -0.28
VAMP7-201ENST00000262640 SERINC3Q13530 473 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 KYNUQ16719 465 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 PRSS36Q5K4E3 855 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 SYCP2LQ5T4T6 812 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 ZNF697Q5TEC3 545 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 ZBED8Q8IZ13 594 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 CMTM8Q8IZV2 173 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 HJURPQ8NCD3 748 aaPredicted RBP13.3□□□□□ -0.28
VAMP7-201ENST00000262640 MAGEH1Q9H213 219 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 SP110Q9HB58 689 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 XAB2Q9HCS7 855 aaKnown RBP13.3□□□□□ -0.28
VAMP7-201ENST00000262640 DOCK4Q8N1I0 1966 aa13.3□□□□□ -0.28
VAMP7-201ENST00000262640 LEFTY2O00292 366 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 GFRA2O00451 464 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 PAPLNO95428 1278 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 ACSL3O95573 720 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 CD68P34810 354 aaPredicted RBP13.29□□□□□ -0.28
VAMP7-201ENST00000262640 BBS9Q3SYG4 887 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 DNAJC21Q5F1R6 531 aaKnown RBP13.29□□□□□ -0.28
VAMP7-201ENST00000262640 GRASPQ7Z6J2 395 aaPredicted RBP13.29□□□□□ -0.28
VAMP7-201ENST00000262640 SETD3Q86TU7 594 aaPredicted RBP13.29□□□□□ -0.28
VAMP7-201ENST00000262640 ZNF354CQ86Y25 554 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 TNS4Q8IZW8 715 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 NSMCE1Q8WV22 266 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 PPP2R3CQ969Q6 453 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 C9orf72Q96LT7 481 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 PPP1R2P1Q96PQ5 205 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 DENND4CQ5VZ89 1909 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 CHD7Q9P2D1 2997 aa13.29□□□□□ -0.28
VAMP7-201ENST00000262640 ILVBLA1L0T0 632 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms