RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 C16orf89Q6UX73 402 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 ZFP28Q8NHY6 868 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 LENG1Q96BZ8 264 aaPredicted RBP17.82■□□□□ 0.44
TRAM1-201ENST00000262213 ILKAPQ9H0C8 392 aaPredicted RBP17.82■□□□□ 0.44
TRAM1-201ENST00000262213 VPS33BQ9H267 617 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 SEMA6AQ9H2E6 1030 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 ASB7Q9H672 318 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 TASP1Q9H6P5 420 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 DOCK1Q14185 1865 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 PIGNO95427 931 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 JUNP05412 331 aaKnown RBP17.82■□□□□ 0.44
TRAM1-201ENST00000262213 MCF2P10911 925 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 GLDCP23378 1020 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 TNFAIP2Q03169 654 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 PKDCCQ504Y2 493 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 GJC2Q5T442 439 aaPredicted RBP17.82■□□□□ 0.44
TRAM1-201ENST00000262213 B3GNT6Q6ZMB0 384 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 URGCPQ8TCY9 931 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 NPAS2Q99743 824 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 MRPL1Q9BYD6 325 aaKnown RBP17.82■□□□□ 0.44
TRAM1-201ENST00000262213 VRTNQ9H8Y1 702 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 GALNT8Q9NY28 637 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 KIAA1257Q9ULG3 409 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 FIS1Q9Y3D6 152 aa17.82■□□□□ 0.44
TRAM1-201ENST00000262213 RGSL1A5PLK6 1076 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 KPNA7A9QM74 516 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 PHGDHO43175 533 aaKnown RBP17.81■□□□□ 0.44
TRAM1-201ENST00000262213 DENRO43583 198 aaKnown RBP17.81■□□□□ 0.44
TRAM1-201ENST00000262213 PRDX6P30041 224 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 DPP6P42658 865 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 SULT1E1P49888 294 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 ART3Q13508 389 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 NRF1Q16656 503 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 AMIGO2Q86SJ2 522 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 IARS2Q9NSE4 1012 aaKnown RBP17.81■□□□□ 0.44
TRAM1-201ENST00000262213 RHBDL2Q9NX52 303 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 UBP1Q9NZI7 540 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 PHF24Q9UPV7 400 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 ACAT1P24752 427 aaKnown RBP17.81■□□□□ 0.44
TRAM1-201ENST00000262213 GRIA4P48058 902 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 NME3Q13232 169 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 ZNF423Q2M1K9 1284 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 CELF3Q5SZQ8 465 aaKnown RBP17.81■□□□□ 0.44
TRAM1-201ENST00000262213 CERCAMQ5T4B2 595 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 SEL1L3Q68CR1 1132 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 SPATA6LQ8N4H0 392 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.81■□□□□ 0.44
TRAM1-201ENST00000262213 SREK1Q8WXA9 508 aaKnown RBP17.81■□□□□ 0.44
TRAM1-201ENST00000262213 WDR41Q9HAD4 459 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 PTTG2Q9NZH5 202 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 NDUFA13Q9P0J0 144 aa17.81■□□□□ 0.44
TRAM1-201ENST00000262213 LIMK2P53671 638 aa17.8■□□□□ 0.44
TRAM1-201ENST00000262213 NAGLUP54802 743 aa17.8■□□□□ 0.44
TRAM1-201ENST00000262213 ARL13AQ5H913 290 aaPredicted RBP17.8■□□□□ 0.44
TRAM1-201ENST00000262213 DLK2Q6UY11 383 aa17.8■□□□□ 0.44
TRAM1-201ENST00000262213 SPNS2Q8IVW8 549 aa17.8■□□□□ 0.44
TRAM1-201ENST00000262213 CEP70Q8NHQ1 597 aa17.8■□□□□ 0.44
TRAM1-201ENST00000262213 NLRP7Q8WX94 980 aa17.8■□□□□ 0.44
TRAM1-201ENST00000262213 C20orf96Q9NUD7 363 aaPredicted RBP17.8■□□□□ 0.44
TRAM1-201ENST00000262213 HSFX1Q9UBD0 423 aa17.8■□□□□ 0.44
TRAM1-201ENST00000262213 RIMS3Q9UJD0 308 aa17.8■□□□□ 0.44
TRAM1-201ENST00000262213 FGFR3P22607 806 aa17.8■□□□□ 0.44
TRAM1-201ENST00000262213 PTPN9P43378 593 aa17.8■□□□□ 0.44
TRAM1-201ENST00000262213 DCAF6Q58WW2 860 aa17.8■□□□□ 0.44
TRAM1-201ENST00000262213 SPANXN3Q5MJ09 141 aa17.8■□□□□ 0.44
TRAM1-201ENST00000262213 DEFB106AQ8N104 65 aa17.8■□□□□ 0.44
TRAM1-201ENST00000262213 KLHL32Q96NJ5 620 aa17.8■□□□□ 0.44
TRAM1-201ENST00000262213 ADA2Q9NZK5 511 aa17.8■□□□□ 0.44
TRAM1-201ENST00000262213 VANGL2Q9ULK5 521 aa17.8■□□□□ 0.44
TRAM1-201ENST00000262213 FAM200BP0CF97 657 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 TGFB3P10600 412 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 INSRRP14616 1297 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 PCSK6P29122 969 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 NAB1Q13506 487 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 CCNYL1Q8N7R7 359 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 C18orf25Q96B23 403 aaPredicted RBP17.79■□□□□ 0.44
TRAM1-201ENST00000262213 ACE2Q9BYF1 805 aaPredicted RBP17.79■□□□□ 0.44
TRAM1-201ENST00000262213 PDGFCQ9NRA1 345 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 CHRAC1Q9NRG0 131 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.79■□□□□ 0.44
TRAM1-201ENST00000262213 TUBGCP4Q9UGJ1 667 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 ZDHHC2Q9UIJ5 367 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 USP3Q9Y6I4 520 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 TMEM233B4DJY2 109 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 AP1G1O43747 822 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 CSPG5O95196 566 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 TNFAIP8O95379 198 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 FAM58BPP0C7Q3 252 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 EDNRBP24530 442 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 RPL14P50914 215 aaKnown RBP17.79■□□□□ 0.44
TRAM1-201ENST00000262213 ZNF280AP59817 542 aaPredicted RBP17.79■□□□□ 0.44
TRAM1-201ENST00000262213 PIGGQ5H8A4 983 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 LCA5Q86VQ0 697 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 RNF139Q8WU17 664 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 NAT9Q9BTE0 207 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 LRRC40Q9H9A6 602 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 LMCD1Q9NZU5 365 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 ZNF112Q9UJU3 913 aa17.79■□□□□ 0.44
TRAM1-201ENST00000262213 PRPF19Q9UMS4 504 aaKnown RBP17.79■□□□□ 0.44
TRAM1-201ENST00000262213 H3BSA7 217 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms