RNA–Protein interactions for RNA: ENST00000261448.5

CASQ2-201, Transcript of calsequestrin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASQ2, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2-201ENST00000261448 CERCAMQ5T4B2 595 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.1□□□□□ -0.47
CASQ2-201ENST00000261448 DEFB128Q7Z7B8 93 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 TMEM135Q86UB9 458 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 KLHDC8BQ8IXV7 354 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 ATPAF2Q8N5M1 289 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 GRAMD1AQ96CP6 724 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 MTBPQ96DY7 904 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 RMDN2Q96LZ7 410 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 SEPT5Q99719 369 aaPredicted RBP12.1□□□□□ -0.47
CASQ2-201ENST00000261448 PPP1R12CQ9BZL4 782 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 RNF208Q9H0X6 261 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 ARL2BPQ9Y2Y0 163 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 RPS6KL1Q9Y6S9 549 aa12.1□□□□□ -0.47
CASQ2-201ENST00000261448 ADAM12O43184 909 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 HOXA2O43364 376 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 EFEMP2O95967 443 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 ERVK-10P10266 1014 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 ALADP13716 330 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 MNX1P50219 401 aaPredicted RBP12.09□□□□□ -0.47
CASQ2-201ENST00000261448 MS4A13Q5J8X5 152 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 ANKRD33Q7Z3H0 272 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 DNAAF3Q8N9W5 541 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 SPATA22Q8NHS9 363 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 SPPL2BQ8TCT7 592 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 THOC1Q96FV9 657 aaKnown RBP12.09□□□□□ -0.47
CASQ2-201ENST00000261448 SPATA17Q96L03 361 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 IL12RB2Q99665 862 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 TTPALQ9BTX7 342 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 MRPL9Q9BYD2 267 aaKnown RBP12.09□□□□□ -0.47
CASQ2-201ENST00000261448 SLC13A1Q9BZW2 595 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 CLIC5Q9NZA1 410 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 ZCWPW2A0A1B0GU75 182 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 WASH4PA8MWX3 477 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 COPEO14579 308 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 MATN3O15232 486 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 CCL5P13501 91 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 TPH1P17752 444 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 SERPINB9P50453 376 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 ELAVL2Q12926 359 aaKnown RBP12.09□□□□□ -0.47
CASQ2-201ENST00000261448 PSMD5Q16401 504 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 PACS1Q6VY07 963 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 SLC39A5Q6ZMH5 540 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 TIFABQ6ZNK6 161 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 ANKS3Q6ZW76 656 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 OTOAQ7RTW8 1153 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 VWCEQ96DN2 955 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 MANSC1Q9H8J5 431 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 PRDM5Q9NQX1 630 aaPredicted RBP12.09□□□□□ -0.47
CASQ2-201ENST00000261448 BFARQ9NZS9 450 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 PLLPQ9Y342 182 aa12.09□□□□□ -0.47
CASQ2-201ENST00000261448 RTN3O95197 1032 aaPredicted RBP12.08□□□□□ -0.48
CASQ2-201ENST00000261448 MT-CYBP00156 380 aaPredicted RBP12.08□□□□□ -0.48
CASQ2-201ENST00000261448 SLC2A3P11169 496 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 ATF6P18850 670 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 SCTRP47872 440 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 PAPOLAP51003 745 aaKnown RBP12.08□□□□□ -0.48
CASQ2-201ENST00000261448 SPANXN3Q5MJ09 141 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 MIB1Q86YT6 1006 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 MICALL1Q8N3F8 863 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 GIPC2Q8TF65 315 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 MFSD3Q96ES6 412 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 CERS2Q96G23 380 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 VN1R3Q9BXE9 311 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 LRRC40Q9H9A6 602 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 TLR8Q9NR97 1041 aaKnown RBP12.08□□□□□ -0.48
CASQ2-201ENST00000261448 MAGED2Q9UNF1 606 aaPredicted RBP12.08□□□□□ -0.48
CASQ2-201ENST00000261448 CDY1Q9Y6F8 540 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 FNDC1Q4ZHG4 1894 aaPredicted RBP12.08□□□□□ -0.48
CASQ2-201ENST00000261448 H7C4K7 107 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 ATP9BO43861 1147 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 CNTN5O94779 1100 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 UPP2O95045 317 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 TOP3BO95985 862 aaKnown RBP12.08□□□□□ -0.48
CASQ2-201ENST00000261448 ALDOAP04075 364 aaKnown RBP12.08□□□□□ -0.48
CASQ2-201ENST00000261448 ALFQ53S48 1182 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 C10orf120Q5SQS8 335 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 CHSY1Q86X52 802 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 LRRC43Q8N309 656 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 FITM2Q8N6M3 262 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 ANKLE1Q8NAG6 615 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 PPM1EQ8WY54 764 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 CDKL2Q92772 493 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 CHRAC1Q9NRG0 131 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 MKS1Q9NXB0 559 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 MARCH2Q9P0N8 246 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 CAPN7Q9Y6W3 813 aa12.08□□□□□ -0.48
CASQ2-201ENST00000261448 NYNRINQ9P2P1 1898 aaKnown RBP12.08□□□□□ -0.48
CASQ2-201ENST00000261448 IGLV3-10A0A075B6K4 115 aa12.07□□□□□ -0.48
CASQ2-201ENST00000261448 USP1O94782 785 aa12.07□□□□□ -0.48
CASQ2-201ENST00000261448 PEX11BO96011 259 aa12.07□□□□□ -0.48
CASQ2-201ENST00000261448 IGLV3-27P01718 113 aa12.07□□□□□ -0.48
CASQ2-201ENST00000261448 ZDHHC11BP0C7U3 371 aa12.07□□□□□ -0.48
CASQ2-201ENST00000261448 RPL17P18621 184 aaKnown RBP12.07□□□□□ -0.48
CASQ2-201ENST00000261448 CNTFP26441 200 aa12.07□□□□□ -0.48
CASQ2-201ENST00000261448 SERPINB4P48594 390 aa12.07□□□□□ -0.48
CASQ2-201ENST00000261448 PSEN1P49768 467 aa12.07□□□□□ -0.48
CASQ2-201ENST00000261448 TLE2Q04725 743 aa12.07□□□□□ -0.48
CASQ2-201ENST00000261448 SMARCB1Q12824 385 aa12.07□□□□□ -0.48
CASQ2-201ENST00000261448 TRIP4Q15650 581 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms