RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 MIPP30301 263 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 L1CAMP32004 1257 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 ZNF234Q14588 700 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 PLEKHG6Q3KR16 790 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 ZNF662Q6ZS27 426 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 TSTD1Q8NFU3 115 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 ZNF564Q8TBZ8 553 aaPredicted RBP17.22■□□□□ 0.35
SDCBP-201ENST00000260130 CYB5D2Q8WUJ1 264 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 BTBD6Q96KE9 485 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 GABRG3Q99928 467 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 POLMQ9NP87 494 aaPredicted RBP17.22■□□□□ 0.35
SDCBP-201ENST00000260130 PCSK1NQ9UHG2 260 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 GUCA1BQ9UMX6 200 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 CACNA1HO95180 2353 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 PRPSAP2O60256 369 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 LRIG2O94898 1065 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 APBB3O95704 486 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 RHOXF2BP0C7M4 288 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 MZF1P28698 734 aaPredicted RBP17.22■□□□□ 0.35
SDCBP-201ENST00000260130 PCK1P35558 622 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 CSKP41240 450 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 IL12RB1P42701 662 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 PXNP49023 591 aaPredicted RBP17.22■□□□□ 0.35
SDCBP-201ENST00000260130 PLK1P53350 603 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 NHLH1Q02575 133 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 DMWDQ09019 674 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 ENPP2Q13822 863 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 HEATR6Q6AI08 1181 aaKnown RBP17.22■□□□□ 0.35
SDCBP-201ENST00000260130 RWDD4Q6NW29 188 aaKnown RBP17.22■□□□□ 0.35
SDCBP-201ENST00000260130 TFAP2DQ7Z6R9 452 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 APCDD1Q8J025 514 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 PYROXD2Q8N2H3 581 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 NIPA2Q8N8Q9 360 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 ZBTB44Q8NCP5 570 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 RHOXF2Q9BQY4 288 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 ACBD3Q9H3P7 528 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 FAM86C1Q9NVL1 165 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 PCDHGA2Q9Y5H1 932 aa17.22■□□□□ 0.35
SDCBP-201ENST00000260130 LCA5LO95447 670 aa17.21■□□□□ 0.35
SDCBP-201ENST00000260130 ASLP04424 464 aa17.21■□□□□ 0.35
SDCBP-201ENST00000260130 OR1E1P30953 314 aa17.21■□□□□ 0.35
SDCBP-201ENST00000260130 CYLC1P35663 651 aaPredicted RBP17.21■□□□□ 0.35
SDCBP-201ENST00000260130 HNRNPH2P55795 449 aaKnown RBP17.21■□□□□ 0.35
SDCBP-201ENST00000260130 PTPRNQ16849 979 aa17.21■□□□□ 0.35
SDCBP-201ENST00000260130 ERMARDQ5T6L9 678 aa17.21■□□□□ 0.35
SDCBP-201ENST00000260130 SETD3Q86TU7 594 aaPredicted RBP17.21■□□□□ 0.35
SDCBP-201ENST00000260130 OR52K2Q8NGK3 314 aa17.21■□□□□ 0.35
SDCBP-201ENST00000260130 FEM1AQ9BSK4 669 aa17.21■□□□□ 0.35
SDCBP-201ENST00000260130 RETREG1Q9H6L5 497 aa17.21■□□□□ 0.35
SDCBP-201ENST00000260130 EBF1Q9UH73 591 aa17.21■□□□□ 0.35
SDCBP-201ENST00000260130 ADAM21Q9UKJ8 722 aa17.21■□□□□ 0.35
SDCBP-201ENST00000260130 INTUQ9ULD6 942 aa17.21■□□□□ 0.35
SDCBP-201ENST00000260130 USP18Q9UMW8 372 aa17.21■□□□□ 0.35
SDCBP-201ENST00000260130 REXO2Q9Y3B8 237 aaKnown RBP17.21■□□□□ 0.35
SDCBP-201ENST00000260130 MYO15AQ9UKN7 3530 aa17.21■□□□□ 0.35
SDCBP-201ENST00000260130 DMDP11532 3685 aa17.21■□□□□ 0.35
SDCBP-201ENST00000260130 CCDC163A0A0D9SF12 145 aa17.21■□□□□ 0.34
SDCBP-201ENST00000260130 A0A1W2PQF6 199 aa17.21■□□□□ 0.34
SDCBP-201ENST00000260130 H3BQF6 201 aa17.21■□□□□ 0.34
SDCBP-201ENST00000260130 RHOCP08134 193 aa17.21■□□□□ 0.34
SDCBP-201ENST00000260130 MCM3P25205 808 aa17.21■□□□□ 0.34
SDCBP-201ENST00000260130 FNTBP49356 437 aa17.21■□□□□ 0.34
SDCBP-201ENST00000260130 C6orf118Q5T5N4 469 aa17.21■□□□□ 0.34
SDCBP-201ENST00000260130 WDR93Q6P2C0 686 aa17.21■□□□□ 0.34
SDCBP-201ENST00000260130 ZC3H14Q6PJT7 736 aaKnown RBP17.21■□□□□ 0.34
SDCBP-201ENST00000260130 SERPINA13PQ6UXR4 307 aa17.21■□□□□ 0.34
SDCBP-201ENST00000260130 LONP2Q86WA8 852 aa17.21■□□□□ 0.34
SDCBP-201ENST00000260130 TBC1D31Q96DN5 1066 aa17.21■□□□□ 0.34
SDCBP-201ENST00000260130 ALG14Q96F25 216 aa17.21■□□□□ 0.34
SDCBP-201ENST00000260130 PEBP4Q96S96 227 aa17.21■□□□□ 0.34
SDCBP-201ENST00000260130 ZNF212Q9UDV6 495 aa17.21■□□□□ 0.34
SDCBP-201ENST00000260130 ALDH1A2O94788 518 aa17.2■□□□□ 0.34
SDCBP-201ENST00000260130 RHOQP17081 205 aa17.2■□□□□ 0.34
SDCBP-201ENST00000260130 MAGEA1P43355 309 aa17.2■□□□□ 0.34
SDCBP-201ENST00000260130 FNDC3BQ53EP0 1204 aaKnown RBP17.2■□□□□ 0.34
SDCBP-201ENST00000260130 DAB2IPQ5VWQ8 1189 aa17.2■□□□□ 0.34
SDCBP-201ENST00000260130 RNF219Q5W0B1 726 aaPredicted RBP17.2■□□□□ 0.34
SDCBP-201ENST00000260130 SLC35G2Q8TBE7 412 aa17.2■□□□□ 0.34
SDCBP-201ENST00000260130 EPAS1Q99814 870 aa17.2■□□□□ 0.34
SDCBP-201ENST00000260130 SNRNP25Q9BV90 132 aaKnown RBP17.2■□□□□ 0.34
SDCBP-201ENST00000260130 GPATCH2LQ9NWQ4 482 aa17.2■□□□□ 0.34
SDCBP-201ENST00000260130 AP4E1Q9UPM8 1137 aa17.2■□□□□ 0.34
SDCBP-201ENST00000260130 OR51B4Q9Y5P0 310 aa17.2■□□□□ 0.34
SDCBP-201ENST00000260130 RAD54BQ9Y620 910 aa17.2■□□□□ 0.34
SDCBP-201ENST00000260130 R4GN57 208 aa17.2■□□□□ 0.34
SDCBP-201ENST00000260130 KRT86O43790 486 aa17.19■□□□□ 0.34
SDCBP-201ENST00000260130 CREB3O43889 395 aa17.19■□□□□ 0.34
SDCBP-201ENST00000260130 IPO7O95373 1038 aaKnown RBP17.19■□□□□ 0.34
SDCBP-201ENST00000260130 VSNL1P62760 191 aa17.19■□□□□ 0.34
SDCBP-201ENST00000260130 ECT2LQ008S8 904 aa17.19■□□□□ 0.34
SDCBP-201ENST00000260130 SEMA3BQ13214 749 aa17.19■□□□□ 0.34
SDCBP-201ENST00000260130 SPA17Q15506 151 aa17.19■□□□□ 0.34
SDCBP-201ENST00000260130 ANO7Q6IWH7 933 aa17.19■□□□□ 0.34
SDCBP-201ENST00000260130 CYP4V2Q6ZWL3 525 aaPredicted RBP17.19■□□□□ 0.34
SDCBP-201ENST00000260130 WDR5BQ86VZ2 330 aa17.19■□□□□ 0.34
SDCBP-201ENST00000260130 PSTKQ8IV42 348 aaKnown RBP17.19■□□□□ 0.34
SDCBP-201ENST00000260130 MUC3BQ9H195 1237 aa17.19■□□□□ 0.34
SDCBP-201ENST00000260130 TMEM245Q9H330 911 aa17.19■□□□□ 0.34
SDCBP-201ENST00000260130 DHX35Q9H5Z1 703 aaKnown RBP17.19■□□□□ 0.34
SDCBP-201ENST00000260130 OSGEPQ9NPF4 335 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms