RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 FZD4Q9ULV1 537 aa19.56■□□□□ 0.72
TM6SF1-201ENST00000258909 GOLGA8CPA6NN73 597 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 WNT9AO14904 365 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 UCHL3P15374 230 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 GOT1P17174 413 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 C5AR1P21730 350 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 POM121L1PQ3SYA9 428 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 TCP11X2Q5H9J9 407 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 FAM102AQ5T9C2 384 aaPredicted RBP19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 LRSAM1Q6UWE0 723 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 DBX2Q6ZNG2 339 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 NOP9Q86U38 636 aaKnown RBP19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 ADAMTS14Q8WXS8 1223 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 C18orf8Q96DM3 657 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 TBCBQ99426 244 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 NAA15Q9BXJ9 866 aaKnown RBP19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 WDCPQ9H6R7 721 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 SLC25A13Q9UJS0 675 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 VPS28Q9UK41 221 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 SARDHQ9UL12 918 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 PCDHGB2Q9Y5G2 931 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 DOCK9Q9BZ29 2069 aa19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 DSPP15924 2871 aaKnown RBP19.55■□□□□ 0.72
TM6SF1-201ENST00000258909 GOLGA8SH3BPF8 625 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 FLRT2O43155 660 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 BNIP3LO60238 219 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 ADH1BP00325 375 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 WNT1P04628 370 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 CDH5P33151 784 aaPredicted RBP19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 CTSKP43235 329 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 CXCR3P49682 368 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 ADPRHP54922 357 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 OXCT1P55809 520 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 C21orf59P57076 290 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 RACK1P63244 317 aaKnown RBP19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 ALFQ53S48 1182 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 ERICH1Q86X53 443 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 XYLT1Q86Y38 959 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 ZDHHC17Q8IUH5 632 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 BAHD1Q8TBE0 780 aaPredicted RBP19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 ZCCHC14Q8WYQ9 949 aaKnown RBP19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 ACE2Q9BYF1 805 aaPredicted RBP19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 AASDHPPTQ9NRN7 309 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 ARHGEF38Q9NXL2 777 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 STAP1Q9ULZ2 295 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 APOBEC2Q9Y235 224 aaKnown RBP19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 OR51B4Q9Y5P0 310 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 TBC1D3DA0A087WVF3 549 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 TBC1D3IA0A087WXS9 549 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 TBC1D3EA0A087X179 549 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 TBC1D3KA0A087X1G2 549 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 TBC1D3FA6NER0 549 aaPredicted RBP19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 TBC1D3LB9A6J9 549 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 CLDN11O75508 207 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 MMEP08473 750 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 ATXN1LP0C7T5 689 aaKnown RBP19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 TBC1D3HP0C7X1 549 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 DRD3P35462 400 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 GABRB2P47870 512 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 KLK7P49862 253 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 PPP2CBP62714 309 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 PPP2CAP67775 309 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 DEUP1Q05D60 604 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 SUZ12Q15022 739 aaKnown RBP19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 DLG2Q15700 870 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 TBC1D3GQ6DHY5 549 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 SMYD5Q6GMV2 418 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 TBC1D3CQ6IPX1 549 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 Q6ZVU0 165 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 GLRX5Q86SX6 157 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 TBC1D3Q8IZP1 549 aaPredicted RBP19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 CPA5Q8WXQ8 436 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 SPAG5Q96R06 1193 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 MUC3BQ9H195 1237 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 VPS16Q9H269 839 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 LMBRD1Q9NUN5 540 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 PKD1L2Q7Z442 2459 aa19.54■□□□□ 0.72
TM6SF1-201ENST00000258909 PLXNB3Q9ULL4 1909 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 PTPRBP23467 1997 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 ANKRD11Q6UB99 2663 aaPredicted RBP19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 FAM221BA6H8Z2 402 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 F8VZ95 297 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 VILLO15195 856 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 ATP9BO43861 1147 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 RTN2O75298 545 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 MT-CO1P00395 513 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 EEF1GP26641 437 aaKnown RBP19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 FLT3P36888 993 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 CCT8P50990 548 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 CDH4P55283 916 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 C5orf22Q49AR2 442 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 BRMS1LQ5PSV4 323 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 TRNP1Q6NT89 227 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 OR8D1Q8WZ84 308 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 NT5C3BQ969T7 300 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 PPP1R9BQ96SB3 815 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 TOR4AQ9NXH8 423 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 RRN3Q9NYV6 651 aa19.53■□□□□ 0.72
TM6SF1-201ENST00000258909 MPP6Q9NZW5 540 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms