RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 ARFIP2P53365 341 aa13.4□□□□□ -0.26
THSD1-201ENST00000258613 MAXP61244 160 aa13.4□□□□□ -0.26
THSD1-201ENST00000258613 LGSNQ5TDP6 509 aa13.4□□□□□ -0.26
THSD1-201ENST00000258613 DCLRE1AQ6PJP8 1040 aa13.4□□□□□ -0.26
THSD1-201ENST00000258613 CLNKQ7Z7G1 428 aa13.4□□□□□ -0.26
THSD1-201ENST00000258613 ARHGAP12Q8IWW6 846 aa13.4□□□□□ -0.26
THSD1-201ENST00000258613 SPATA6LQ8N4H0 392 aa13.4□□□□□ -0.26
THSD1-201ENST00000258613 AGR3Q8TD06 166 aa13.4□□□□□ -0.26
THSD1-201ENST00000258613 E2F7Q96AV8 911 aa13.4□□□□□ -0.26
THSD1-201ENST00000258613 GLT1D1Q96MS3 346 aa13.4□□□□□ -0.26
THSD1-201ENST00000258613 EBF4Q9BQW3 602 aa13.4□□□□□ -0.26
THSD1-201ENST00000258613 OXCT2Q9BYC2 517 aaPredicted RBP13.4□□□□□ -0.26
THSD1-201ENST00000258613 ARHGEF3Q9NR81 526 aa13.4□□□□□ -0.26
THSD1-201ENST00000258613 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.4□□□□□ -0.26
THSD1-201ENST00000258613 MTO1Q9Y2Z2 717 aaKnown RBP13.4□□□□□ -0.26
THSD1-201ENST00000258613 ZCWPW2A0A1B0GU75 182 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 ALDH1A2O94788 518 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 AP2A1O95782 977 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 TROVE2P10155 538 aaKnown RBP eCLIP13.39□□□□□ -0.27
THSD1-201ENST00000258613 CALRP27797 417 aaKnown RBP13.39□□□□□ -0.27
THSD1-201ENST00000258613 ALDH3A1P30838 453 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 TUBP50607 506 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 RAB27AP51159 221 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 ZBTB16Q05516 673 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 GALNT2Q10471 571 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 PCSK7Q16549 785 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 TCTN1Q2MV58 587 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 EML3Q32P44 896 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 STEAP4Q687X5 459 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 RSPO2Q6UXX9 243 aaPredicted RBP13.39□□□□□ -0.27
THSD1-201ENST00000258613 STRA8Q7Z7C7 330 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 ITFG2Q969R8 447 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 PGAP3Q96FM1 320 aaPredicted RBP13.39□□□□□ -0.27
THSD1-201ENST00000258613 BRD8Q9H0E9 1235 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 UNC80Q8N2C7 3258 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 CNTN5O94779 1100 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 PRKCGP05129 697 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 POLBP06746 335 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 TYK2P29597 1187 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 AVPR1AP37288 418 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 EFEMP1Q12805 493 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 ARTNQ5T4W7 220 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 FAM171A1Q5VUB5 890 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 FAM219BQ5XKK7 198 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 RNF180Q86T96 592 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 FBXO27Q8NI29 283 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 TEKT5Q96M29 485 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 KLHL5Q96PQ7 755 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 NMUR2Q9GZQ4 415 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 IARS2Q9NSE4 1012 aaKnown RBP13.39□□□□□ -0.27
THSD1-201ENST00000258613 GMIPQ9P107 970 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 CPSF2Q9P2I0 782 aaKnown RBP13.39□□□□□ -0.27
THSD1-201ENST00000258613 SLC2A6Q9UGQ3 507 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 MYO16Q9Y6X6 1858 aa13.39□□□□□ -0.27
THSD1-201ENST00000258613 RANBP2P49792 3224 aaKnown RBP13.39□□□□□ -0.27
THSD1-201ENST00000258613 C2CD2LO14523 706 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 F9P00740 461 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 CCNB1P14635 433 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 ZNF460Q14592 562 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 CTC1Q2NKJ3 1217 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 ANKRD20A4Q4UJ75 823 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 FASTKD1Q53R41 847 aaKnown RBP13.38□□□□□ -0.27
THSD1-201ENST00000258613 KCTD11Q693B1 232 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 C4orf22Q6V702 233 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 DCLK2Q8N568 766 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 PCSK9Q8NBP7 692 aaKnown RBP13.38□□□□□ -0.27
THSD1-201ENST00000258613 DBF4BQ8NFT6 615 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 AGAP11Q8TF27 550 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 MYEOVQ96EZ4 313 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 GBA3Q9H227 469 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 C20orf96Q9NUD7 363 aaPredicted RBP13.38□□□□□ -0.27
THSD1-201ENST00000258613 BFARQ9NZS9 450 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 TXNDC16Q9P2K2 825 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 HS3ST4Q9Y661 456 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 CCL22O00626 93 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 TADA2AO75478 443 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 CCNFP41002 786 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 PSMD5Q16401 504 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 FSTL4Q6MZW2 842 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 SLC24A5Q71RS6 500 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 CHSY1Q86X52 802 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 COLGALT2Q8IYK4 626 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 RAET1EQ8TD07 263 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 HDAC11Q96DB2 347 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 FERMT1Q9BQL6 677 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 FTHL17Q9BXU8 183 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 NYNRINQ9P2P1 1898 aaKnown RBP13.38□□□□□ -0.27
THSD1-201ENST00000258613 SCAMP3O14828 347 aaKnown RBP13.38□□□□□ -0.27
THSD1-201ENST00000258613 BPGMP07738 259 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 MLNP12872 115 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 AQP5P55064 265 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 ACCSLQ4AC99 568 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 ALFQ53S48 1182 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 VARS2Q5ST30 1063 aaKnown RBP13.38□□□□□ -0.27
THSD1-201ENST00000258613 PIK3R6Q5UE93 754 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 PDZD4Q76G19 769 aaPredicted RBP13.38□□□□□ -0.27
THSD1-201ENST00000258613 TAS1R1Q7RTX1 841 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 ZNF354CQ86Y25 554 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 C10orf107Q8IVU9 208 aa13.38□□□□□ -0.27
THSD1-201ENST00000258613 GBP7Q8N8V2 638 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms