RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 PODNQ7Z5L7 613 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 UBR7Q8N806 425 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 FNDC8Q8TC99 324 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 KCTD4Q8WVF5 259 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 C12orf43Q96C57 262 aaKnown RBP12.57□□□□□ -0.4
USP30-201ENST00000257548 AGAP2Q99490 1192 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 ACE2Q9BYF1 805 aaPredicted RBP12.57□□□□□ -0.4
USP30-201ENST00000257548 CDH19Q9H159 772 aa12.57□□□□□ -0.4
USP30-201ENST00000257548 BIRC5O15392 142 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 CCNT2O60583 730 aaKnown RBP12.56□□□□□ -0.4
USP30-201ENST00000257548 RNASEH2AO75792 299 aaKnown RBP12.56□□□□□ -0.4
USP30-201ENST00000257548 MICAL2O94851 1124 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 C2P06681 752 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 ALDH4A1P30038 563 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 PPARGP37231 505 aaPredicted RBP12.56□□□□□ -0.4
USP30-201ENST00000257548 IRF9Q00978 393 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 MS4A2Q01362 244 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 ZNF252P-AS1Q0IIN9 211 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 INPP5AQ14642 412 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 CYP51A1Q16850 503 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 GOLGA7BQ2TAP0 167 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 PRAMEF18Q5VWM3 479 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 ADCK1Q86TW2 530 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 SIAH1Q8IUQ4 282 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 RTKNQ9BST9 563 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 SNRNP25Q9BV90 132 aaKnown RBP12.56□□□□□ -0.4
USP30-201ENST00000257548 TRIM8Q9BZR9 551 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 PNPLA3Q9NST1 481 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 DDX43Q9NXZ2 648 aaKnown RBP12.56□□□□□ -0.4
USP30-201ENST00000257548 TELO2Q9Y4R8 837 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 RNF103O00237 685 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 UBDO15205 165 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 LSM8O95777 96 aaKnown RBP12.56□□□□□ -0.4
USP30-201ENST00000257548 DLGAP3O95886 979 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 LTFP02788 710 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 EIF4BP23588 611 aaKnown RBP12.56□□□□□ -0.4
USP30-201ENST00000257548 RAD23AP54725 363 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 NOMO1Q15155 1222 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 DUS1LQ6P1R4 473 aaKnown RBP12.56□□□□□ -0.4
USP30-201ENST00000257548 CPNE9Q8IYJ1 553 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.56□□□□□ -0.4
USP30-201ENST00000257548 NSUN6Q8TEA1 469 aaKnown RBP12.56□□□□□ -0.4
USP30-201ENST00000257548 ATG4CQ96DT6 458 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 SYBUQ9NX95 663 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 CIDEBQ9UHD4 219 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 ZNF541Q9H0D2 1346 aa12.56□□□□□ -0.4
USP30-201ENST00000257548 FBP2O00757 339 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 BAIAP3O94812 1187 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 PSMA4P25789 261 aaKnown RBP12.55□□□□□ -0.4
USP30-201ENST00000257548 LRPAP1P30533 357 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 ZNF460Q14592 562 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 POU6F1Q14863 301 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 PCSK7Q16549 785 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 PGS1Q32NB8 556 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 DRICH1Q6PGQ1 229 aaPredicted RBP12.55□□□□□ -0.4
USP30-201ENST00000257548 RPS27LQ71UM5 84 aaKnown RBP12.55□□□□□ -0.4
USP30-201ENST00000257548 C12orf56Q8IXR9 622 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 GMCL1P1Q8NEA9 526 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 IPMKQ8NFU5 416 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 GLMNQ92990 594 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 POPDC2Q9HBU9 364 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 TSPAN16Q9UKR8 245 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 HALP42357 657 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 CA9Q16790 459 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 SH3BP5LQ7L8J4 393 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 ERI1Q8IV48 349 aaKnown RBP12.55□□□□□ -0.4
USP30-201ENST00000257548 AHI1Q8N157 1196 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 ZCCHC7Q8N3Z6 543 aaKnown RBP12.55□□□□□ -0.4
USP30-201ENST00000257548 DNAJB14Q8TBM8 379 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 URGCPQ8TCY9 931 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 HTR3CQ8WXA8 447 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 DCPSQ96C86 337 aaKnown RBP12.55□□□□□ -0.4
USP30-201ENST00000257548 MAGEB5Q9BZ81 275 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 PDGFDQ9GZP0 370 aaPredicted RBP12.55□□□□□ -0.4
USP30-201ENST00000257548 SF3B1O75533 1304 aaKnown RBP eCLIP12.55□□□□□ -0.4
USP30-201ENST00000257548 K7EPI3 171 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 SERPINB1P30740 379 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 PGM5Q15124 567 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 IMPG1Q17R60 797 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 PABPC1LQ4VXU2 614 aaKnown RBP12.55□□□□□ -0.4
USP30-201ENST00000257548 C6orf10Q5SRN2 563 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 TMEM214Q6NUQ4 689 aaKnown RBP12.55□□□□□ -0.4
USP30-201ENST00000257548 SPPL2CQ8IUH8 684 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 MAPK15Q8TD08 544 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 TRAPPC12Q8WVT3 735 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 NCLNQ969V3 563 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 MFSD3Q96ES6 412 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 LRRC4Q9HBW1 653 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 WDR70Q9NW82 654 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 TMX2Q9Y320 296 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 CROCCQ5TZA2 2017 aa12.55□□□□□ -0.4
USP30-201ENST00000257548 NEMP2A6NFY4 417 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 ITGA7Q13683 1181 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 CEACAM7Q14002 265 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 CCDC80Q76M96 950 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 KIAA0319LQ8IZA0 1049 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 SLC7A5P1Q8MH63 180 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 PLD6Q8N2A8 252 aaKnown RBP12.54□□□□□ -0.4
USP30-201ENST00000257548 DHRSXQ8N5I4 330 aa12.54□□□□□ -0.4
USP30-201ENST00000257548 CERS2Q96G23 380 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms