RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 POU2F1P14859 743 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 FGFR4P22455 802 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 SEPHS1P49903 392 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 ERVK-21P61565 698 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 DBPQ10586 325 aaPredicted RBP6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 DDI2Q5TDH0 399 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 C11orf88Q6PI97 169 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 C15orf52Q6ZUT6 534 aaKnown RBP6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 EIF3MQ7L2H7 374 aaKnown RBP6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 KCTD20Q7Z5Y7 419 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 STRA8Q7Z7C7 330 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 SLC22A16Q86VW1 577 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 TRIM9Q9C026 710 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 S100A14Q9HCY8 104 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 FNIP2Q9P278 1114 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 ANKMY1Q9P2S6 941 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 NKX1-2Q9UD57 310 aaPredicted RBP6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 CNOT7Q9UIV1 285 aaKnown RBP6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 PCDHGB4Q9UN71 923 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 KIF13AQ9H1H9 1805 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 KRBA1A5PL33 1030 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 NUPL2O15504 423 aaKnown RBP6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 ZBTB14O43829 449 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 PLATP00750 562 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 NR2C2P49116 596 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 KCNQ4P56696 695 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 ERVK-25P63136 954 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 TLR1Q15399 786 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 TAF1CQ15572 869 aaPredicted RBP6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 NDUFAF5Q5TEU4 345 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 CNNM4Q6P4Q7 775 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 POMZP3Q6PJE2 187 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 AGMOQ6ZNB7 445 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 LURAP1LQ8IV03 231 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 RTKN2Q8IZC4 609 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 LSMEM2Q8N112 164 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 SFRP1Q8N474 314 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 GJD4Q96KN9 370 aaPredicted RBP6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 ERVK-6Q9BXR3 956 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 IDI2Q9BXS1 227 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 ERVK-18Q9QC07 812 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 OGDHLQ9ULD0 1010 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 FAM50BQ9Y247 325 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 CARMIL3Q8ND23 1372 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 USP42Q9H9J4 1324 aaKnown RBP6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 LPXNO60711 386 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 EGFRP00533 1210 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 PAEPP09466 180 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 JUNDP17535 347 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 UGT2B15P54855 530 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 SESN2P58004 480 aaPredicted RBP6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 CUL2Q13617 745 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 MAPKAPK3Q16644 382 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 KHDC1Q4VXA5 237 aaKnown RBP6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 DPY19L3Q6ZPD9 716 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 NIM1KQ8IY84 436 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 LARGE2Q8N3Y3 721 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 SVOPQ8N4V2 548 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF557Q8N988 423 aaPredicted RBP6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 GPR156Q8NFN8 814 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 OR52K2Q8NGK3 314 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 FAM45AQ8TCE6 357 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 GSDMCQ9BYG8 508 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 SDHAF3Q9NRP4 125 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 NYAP2Q9P242 653 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 ALG5Q9Y673 324 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 OR6C70A6NIJ9 312 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 NUDT19A8MXV4 375 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 AHSA1O95433 338 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 GNALP38405 381 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 OR3A3P47888 321 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 TUBP50607 506 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 P2RX3P56373 397 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 SLC29A2Q14542 456 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 EPHA10Q5JZY3 1008 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 MFSD14BQ5SR56 506 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 PPP1R26Q5T8A7 1209 aaPredicted RBP6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 RALGPS2Q86X27 583 aaPredicted RBP6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 DENND6BQ8NEG7 585 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 ADCY4Q8NFM4 1077 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 FAR1Q8WVX9 515 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 HERPUD2Q9BSE4 406 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 GON7Q9BXV9 100 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 AGXT2Q9BYV1 514 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 MANSC1Q9H8J5 431 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 ATP8A2Q9NTI2 1148 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 EXD2Q9NVH0 621 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 TRPM5Q9NZQ8 1165 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 INPP5FQ9Y2H2 1132 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 PJA2O43164 708 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 BRINP1O60477 761 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 CRCPO75575 148 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 CYP2D6P10635 497 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 MYL4P12829 197 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 ALADP13716 330 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 HNF1AP20823 631 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 HK2P52789 917 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 FOXO4P98177 505 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 CDK16Q00536 496 aa6.86□□□□□ -1.31
PDGFRA-201ENST00000257290 GFOD2Q3B7J2 385 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms